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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: BBC3

Summary for BBC3

Gene informationGene symbol

BBC3

Ensembl ID

ENSG00000105327

Entrez ID

27113

Gene nameBCL2 binding component 3
SynonymsJFY1|PUMA
Gene typeprotein_coding
UniProtAcc

Q9BXH1


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Dataset with differentially expressed gene: BBC3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.3353727.07e-19

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.7517130.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.3685060.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2759911.20e-15

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Expression of BBC3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to BBC3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

BBC3

Unusual Activation of Pro-survival Pathway
Page: 1

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MicroRNAs (miRNA) regulating BBC3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
BBC3hsa-let-7a-2-3p90.8375NM_001127241
BBC3hsa-let-7g-3p90.8375NM_001127241
BBC3hsa-miR-29a-5p89.4613NM_001127240
BBC3hsa-miR-144-3p89.0797NM_001127241
BBC3hsa-miR-120085.4877NM_001127241
BBC3hsa-miR-96-3p85.2901NM_001127240
BBC3hsa-miR-450585.0799NM_001127240
BBC3hsa-miR-449684.6967NM_001127240
BBC3hsa-miR-4652-5p84.1187NM_001127241
BBC3hsa-miR-578783.9725NM_001127240
BBC3hsa-miR-432483.7371NM_001127241
BBC3hsa-miR-4732-3p83.5677NM_001127241
BBC3hsa-miR-222-3p81.6439NM_001127241
BBC3hsa-miR-221-3p81.6439NM_001127241
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Motifs and transcription factors (TFs) regulating BBC3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
BBC3transfac_pro__M01299MECP2 (directAnnotation).
BBC3kznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
BBC3transfac_pro__M04826EP300 (directAnnotation).
BBC3cisbp__M08198ELF1 (directAnnotation).
BBC3dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
BBC3taipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAP_reprERG; TEAD4 (directAnnotation).
BBC3taipale__ELK1_full_NACTTCCGSCGGAARMN_reprELK1 (directAnnotation).
BBC3metacluster_2.7IRF1; IRF1; IRF2; IRF2; IRF3; IRF4; IRF5; IRF6; IRF7; IRF7; IRF8; IRF8; IRF9; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; STAT1; STAT1; STAT2 (directAnnotation). PRDM1; PRDM1; PRDM1 (inferredBy_Orthology).
BBC3jaspar__MA0502.2NFYB (directAnnotation).
BBC3metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
BBC3metacluster_22.17NFE2 (directAnnotation).
BBC3cisbp__M01725SREBF2 (inferredBy_Orthology).
BBC3metacluster_22.19NFE2 (directAnnotation).
BBC3metacluster_57.2BACH1; MITF; MITF; TFE3; TFE3; TFE3; TFEB; USF2 (directAnnotation). MITF; TFE3; USF1; USF2 (inferredBy_Orthology).
BBC3jaspar__MA1562.1SOX14 (directAnnotation).
BBC3metacluster_14.23TFE3 (directAnnotation).
BBC3transfac_pro__M05942ZNF700 (directAnnotation).
BBC3transfac_pro__M06084ZNF208 (directAnnotation).
BBC3metacluster_111.6GMEB1; GMEB2 (directAnnotation).
BBC3kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
BBC3taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
BBC3metacluster_143.13ZBTB7A (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."