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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: BAMBI

Summary for BAMBI

Gene informationGene symbol

BAMBI

Ensembl ID

ENSG00000095739

Entrez ID

25805

Gene nameBMP and activin membrane bound inhibitor
SynonymsNMA
Gene typeprotein_coding
UniProtAcc

Q13145


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Dataset with differentially expressed gene: BAMBI

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells1.493230.00e+00

GSE104987

MCF7 cell lineCell lineBreast cancerER+ breast cancerTargeted therapyKDM5-C70NAMalignant cells0.9816560.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.3393549.06e-24

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4619587.93e-43

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Expression of BAMBI in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to BAMBI

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating BAMBI

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
BAMBIhsa-miR-5011-5p99.0842NM_012342
BAMBIhsa-miR-6895-3p97.7023NM_012342
BAMBIhsa-miR-500a-5p93.6593NM_012342
BAMBIhsa-miR-593-3p90.8051NM_012342
BAMBIhsa-miR-6818-3p90.1553NM_012342
BAMBIhsa-miR-19a-3p88.9691NM_012342
BAMBIhsa-miR-19b-3p88.9691NM_012342
BAMBIhsa-miR-513c-3p87.9667NM_012342
BAMBIhsa-miR-513a-3p87.9667NM_012342
BAMBIhsa-miR-548e-5p87.8766NM_012342
BAMBIhsa-miR-10527-5p87.7376NM_012342
BAMBIhsa-miR-106b-5p86.3714NM_012342
BAMBIhsa-miR-20a-5p86.3714NM_012342
BAMBIhsa-miR-1277-5p85.8535NM_012342
BAMBIhsa-miR-95-5p83.9834NM_012342
BAMBIhsa-miR-5000-5p83.5919NM_012342
BAMBIhsa-miR-431183.4433NM_012342
BAMBIhsa-miR-3606-3p83.298NM_012342
BAMBIhsa-miR-4753-3p81.7226NM_012342
BAMBIhsa-miR-1252-3p81.5838NM_012342
BAMBIhsa-miR-1212580.593NM_012342
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Motifs and transcription factors (TFs) regulating BAMBI

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
BAMBItaipale_tf_pairs__CEBPG_ATF4_NNATGAYGCAAT_CAPATF4; CEBPG (directAnnotation).
BAMBIswissregulon__hs__FUBP1FUBP1 (directAnnotation).
BAMBIhocomoco__FOXP1_HUMAN.H11MO.0.AFOXP1 (directAnnotation).
BAMBItaipale_tf_pairs__ATF4_CEBPB_NNATGAYGCAAYN_CAPATF4; CEBPB (directAnnotation).
BAMBItransfac_public__M00278GATA1; LDB1; LMO2; TAL1; TCF3 (inferredBy_Orthology).
BAMBItaipale_tf_pairs__ETV2_HOXA2_NCCGGAAGTMATTA_CAP_reprETV2; HOXA2 (directAnnotation).
BAMBItaipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
BAMBItaipale_tf_pairs__HOXB2_ELF1_SMGGAAGTMRTTA_CAPELF1; HOXB2 (directAnnotation).
BAMBImetacluster_198.7AHR; ZBTB14; ZBTB14; ZBTB14 (directAnnotation).
BAMBIjaspar__MA1957.1ELK1 (directAnnotation).
BAMBImetacluster_135.11NR2C2 (directAnnotation).
BAMBImetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
BAMBImetacluster_144.3ZNF704; ZNF704 (directAnnotation).
BAMBIkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
BAMBIcisbp__M00968MTF2 (directAnnotation).
BAMBImetacluster_160.20JUND; PRDM15 (directAnnotation).
BAMBIcisbp__M00341PAX6 (directAnnotation).
BAMBImetacluster_198.3ZFP64 (directAnnotation).
BAMBImetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
BAMBIjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
BAMBImetacluster_61.1DEAF1; DEAF1 (directAnnotation).
BAMBIcisbp__M00788ZFY (inferredBy_Orthology).
BAMBIkznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
BAMBImetacluster_175.1ZNF283 (directAnnotation).
BAMBIhdpi__ZNF304ZNF304 (directAnnotation).
BAMBItransfac_pro__M02844BCL6B (inferredBy_Orthology).
BAMBImetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
BAMBImetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
BAMBItransfac_pro__M01199TRIM28 (directAnnotation).
BAMBIkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
BAMBImetacluster_151.2ZNF23 (directAnnotation).
BAMBItransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
BAMBItransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
BAMBItransfac_pro__M03806ZBTB7C (directAnnotation).
BAMBItransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
BAMBItransfac_pro__M05981ZNF233 (directAnnotation).
BAMBItaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
BAMBImetacluster_7.7SP2 (directAnnotation). KLF16 (inferredBy_Orthology).
BAMBItransfac_pro__M06111ZNF254 (directAnnotation).
BAMBImetacluster_172.6CHD2; E2F1 (directAnnotation).
BAMBItaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."