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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: BACE2

Summary for BACE2

Gene informationGene symbol

BACE2

Ensembl ID

ENSG00000182240

Entrez ID

25825

Gene namebeta-secretase 2
SynonymsAEPLC|ALP56|CEAP1|DRAP
Gene typeprotein_coding
UniProtAcc

Q9Y5Z0


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Dataset with differentially expressed gene: BACE2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.4526014.77e-05

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.8861390.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-1.108180.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-1.291980.00e+00

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Expression of BACE2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to BACE2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating BACE2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
BACE2hsa-miR-520a-5p96.8209NM_138991
BACE2hsa-miR-525-5p96.8209NM_138991
BACE2hsa-miR-60795.0823NM_138992
BACE2hsa-miR-365894.4946NM_138991
BACE2hsa-miR-450392.6333NM_138991
BACE2hsa-miR-7152-5p92.572NM_138991
BACE2hsa-miR-3180-5p91.8211NM_138992
BACE2hsa-miR-314888.8514NM_138991
BACE2hsa-miR-473986.9468NM_138992
BACE2hsa-miR-4756-5p86.9468NM_138992
BACE2hsa-miR-132186.9468NM_138992
BACE2hsa-miR-6512-3p86.8362NM_138992
BACE2hsa-miR-6720-5p86.8362NM_138992
BACE2hsa-miR-1212386.7116NM_138992
BACE2hsa-miR-4709-3p85.0023NM_138991
BACE2hsa-miR-1225-5p84.3727NM_138991
BACE2hsa-miR-5582-5p83.699NM_138991
BACE2hsa-miR-367183.4319NM_138992
BACE2hsa-miR-429782.4177NM_138992
BACE2hsa-miR-659-3p82.0189NM_138992
BACE2hsa-miR-4755-5p81.5832NM_138991
BACE2hsa-miR-5006-3p81.5832NM_138991
BACE2hsa-miR-6830-5p81.2635NM_138991
BACE2hsa-miR-576-5p80.3642NM_138991
BACE2hsa-miR-3184-3p80.2158NM_138991
BACE2hsa-miR-475180.0334NM_138991
BACE2hsa-miR-516b-5p80.0142NM_138991
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Motifs and transcription factors (TFs) regulating BACE2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
BACE2metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
BACE2hdpi__ETV4ETV4 (directAnnotation).
BACE2jaspar__MA0079.5SP1 (directAnnotation).
BACE2transfac_pro__M04826EP300 (directAnnotation).
BACE2taipale_tf_pairs__ATF4_TEF_RNMTGATGCAATN_CAPATF4; TEF (directAnnotation).
BACE2transfac_pro__M06035ZNF749 (directAnnotation).
BACE2kznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
BACE2transfac_pro__M05788ZNF569 (inferredBy_Orthology).
BACE2kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
BACE2cisbp__M00968MTF2 (directAnnotation).
BACE2cisbp__M00341PAX6 (directAnnotation).
BACE2metacluster_198.3ZFP64 (directAnnotation).
BACE2metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
BACE2kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
BACE2transfac_pro__M02844BCL6B (inferredBy_Orthology).
BACE2metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
BACE2transfac_pro__M01199TRIM28 (directAnnotation).
BACE2transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
BACE2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
BACE2transfac_pro__M03806ZBTB7C (directAnnotation).
BACE2transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
BACE2homer__GKTAATGR_Nkx6.1NKX6-1 (inferredBy_Orthology).
BACE2metacluster_51.10HOXA5 (directAnnotation).
BACE2metacluster_51.30HOXB7 (directAnnotation).
BACE2metacluster_51.22MEOX1 (directAnnotation).
BACE2metacluster_51.7VAX1 (directAnnotation).
BACE2metacluster_51.8HOXB2 (directAnnotation).
BACE2metacluster_51.17HOXB5 (directAnnotation).
BACE2metacluster_51.6EMX1 (directAnnotation).
BACE2tfdimers__MD00024FOXO1; PAX4 (directAnnotation).
BACE2taipale_tf_pairs__GCM2_PITX1_RTRCGGGSGATTAN_CAP_reprGCM2; PITX1 (directAnnotation).
BACE2jaspar__MA0707.2MNX1 (directAnnotation).
BACE2metacluster_51.29HOXD8 (directAnnotation).
BACE2taipale_tf_pairs__ELK1_HOXA3_NCCGGWNNNNNNNNNNNSCATTAN_CAP_reprELK1; HOXA3 (directAnnotation).
BACE2metacluster_51.19HOXD4 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."