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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ATXN3

Summary for ATXN3

Gene informationGene symbol

ATXN3

Ensembl ID

ENSG00000066427

Entrez ID

4287

Gene nameataxin 3
SynonymsATX3|JOS|MJD|SCA3
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: ATXN3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.25039.17e-18

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Expression of ATXN3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ATXN3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ATXN3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ATXN3hsa-miR-5011-5p99.9254NM_001164779
ATXN3hsa-miR-190a-3p99.4849NM_001164779
ATXN3hsa-miR-153-5p99.1499NM_001164779
ATXN3hsa-miR-314898.4372NM_001164779
ATXN3hsa-miR-60798.3381NM_001164778
ATXN3hsa-miR-426298.031NM_001164776
ATXN3hsa-miR-3613-3p97.7771NM_001164779
ATXN3hsa-miR-10527-5p97.5582NM_001164776
ATXN3hsa-miR-548c-3p96.4667NM_001164776
ATXN3hsa-miR-1213395.5076NM_001164776
ATXN3hsa-miR-1271-5p95.5076NM_001164776
ATXN3hsa-miR-96-5p95.0222NM_001164776
ATXN3hsa-miR-3145-3p94.8234NM_001164779
ATXN3hsa-miR-181d-5p94.2035NM_001164776
ATXN3hsa-miR-181b-5p94.2035NM_001164776
ATXN3hsa-miR-181c-5p94.2035NM_001164776
ATXN3hsa-miR-181a-5p94.2035NM_001164776
ATXN3hsa-miR-548ar-3p93.5786NM_001164779
ATXN3hsa-miR-3688-3p93.4212NM_001164776
ATXN3hsa-miR-548a-3p93.1092NM_001164779
ATXN3hsa-miR-548e-3p93.1092NM_001164779
ATXN3hsa-miR-548bc93.1092NM_001164779
ATXN3hsa-miR-548az-3p93.1092NM_001164779
ATXN3hsa-miR-548f-3p93.1092NM_001164779
ATXN3hsa-miR-392692.8117NM_001164776
ATXN3hsa-miR-92b-3p92.3353NM_001164776
ATXN3hsa-miR-92a-3p92.3353NM_001164776
ATXN3hsa-miR-32-5p92.3353NM_001164776
ATXN3hsa-miR-670-5p92.1859NM_001164776
ATXN3hsa-miR-367-3p91.413NM_001164776
ATXN3hsa-miR-363-3p91.413NM_001164776
ATXN3hsa-miR-25-3p91.413NM_001164776
ATXN3hsa-miR-477591.2357NM_001164779
ATXN3hsa-miR-442290.6187NM_001164776
ATXN3hsa-miR-561-3p90.0579NM_001164779
ATXN3hsa-miR-971889.6206NM_001164779
ATXN3hsa-miR-548at-5p89.5146NM_001164779
ATXN3hsa-miR-464289.175NM_001164776
ATXN3hsa-miR-1185-1-3p89.1293NM_001164776
ATXN3hsa-miR-1185-2-3p89.1293NM_001164776
ATXN3hsa-miR-619-5p89.0578NM_001164779
ATXN3hsa-miR-5692a88.9838NM_001164776
ATXN3hsa-miR-6827-3p88.5589NM_001164779
ATXN3hsa-miR-6867-5p88.5169NM_001164776
ATXN3hsa-miR-6835-3p87.3363NM_001164776
ATXN3hsa-miR-3617-5p87.3349NM_001164776
ATXN3hsa-miR-64187.3349NM_001164776
ATXN3hsa-miR-616-5p87.3258NM_001164779
ATXN3hsa-miR-373-5p87.3258NM_001164779
ATXN3hsa-miR-371b-5p87.3258NM_001164779
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Motifs and transcription factors (TFs) regulating ATXN3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ATXN3metacluster_144.8ZNF30; ZNF30 (directAnnotation).
ATXN3metacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
ATXN3metacluster_144.3ZNF704; ZNF704 (directAnnotation).
ATXN3tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
ATXN3kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
ATXN3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ATXN3cisbp__M00249WT1 (directAnnotation).
ATXN3taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
ATXN3homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
ATXN3taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
ATXN3taipale_cyt_meth__KLF12_NGCCGACGCCCW_FL_meth_reprKLF12 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."