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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ATRN

Summary for ATRN

Gene informationGene symbol

ATRN

Ensembl ID

ENSG00000088812

Entrez ID

8455

Gene nameattractin
SynonymsDPPT-L|MGCA
Gene typeprotein_coding
UniProtAcc

O75882


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Dataset with differentially expressed gene: ATRN

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.509711.64e-03

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Expression of ATRN in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ATRN

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ATRN

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ATRNhsa-miR-6508-5p98.7358NM_139321
ATRNhsa-miR-806798.6283NM_139321
ATRNhsa-miR-607798.1921NM_139321
ATRNhsa-miR-568897.813NM_139321
ATRNhsa-miR-4699-3p97.5159NM_139321
ATRNhsa-miR-205-3p97.3946NM_139321
ATRNhsa-miR-495-3p97.0778NM_139321
ATRNhsa-miR-3663-3p95.7958NM_139321
ATRNhsa-miR-138-1-3p95.3153NM_139321
ATRNhsa-miR-6867-5p94.4548NM_139321
ATRNhsa-miR-5582-5p94.4157NM_139321
ATRNhsa-miR-5579-3p94.2221NM_139321
ATRNhsa-miR-5571-5p93.8017NM_139321
ATRNhsa-miR-5010-3p93.7786NM_139321
ATRNhsa-miR-338-5p93.671NM_139321
ATRNhsa-miR-430893.1582NM_139321
ATRNhsa-miR-392493.0346NM_139321
ATRNhsa-miR-1910-5p92.748NM_139321
ATRNhsa-miR-425592.2052NM_139321
ATRNhsa-miR-49292.037NM_139321
ATRNhsa-miR-1245b-3p91.9708NM_139321
ATRNhsa-miR-29c-3p91.1481NM_139321
ATRNhsa-miR-29a-3p91.1481NM_139321
ATRNhsa-miR-29b-3p91.1481NM_139321
ATRNhsa-miR-4423-3p90.9572NM_139321
ATRNhsa-miR-627-3p90.2719NM_139321
ATRNhsa-miR-548x-5p89.9103NM_139321
ATRNhsa-miR-548f-5p89.9103NM_139321
ATRNhsa-miR-548aj-5p89.9103NM_139321
ATRNhsa-miR-548g-5p89.9103NM_139321
ATRNhsa-miR-50789.4598NM_139321
ATRNhsa-miR-5580-3p89.1015NM_139322
ATRNhsa-miR-443888.8797NM_139321
ATRNhsa-miR-452-3p88.6019NM_139321
ATRNhsa-miR-6752-3p88.4531NM_139321
ATRNhsa-miR-475988.3659NM_139321
ATRNhsa-miR-3622a-5p88.2295NM_139321
ATRNhsa-miR-183-5p88.1742NM_139321
ATRNhsa-miR-10397-5p87.8062NM_139321
ATRNhsa-miR-4711-5p87.4641NM_139321
ATRNhsa-miR-5009-3p87.4525NM_139321
ATRNhsa-miR-30d-3p87.1174NM_139321
ATRNhsa-miR-30a-3p87.1174NM_139321
ATRNhsa-miR-30e-3p87.1174NM_139321
ATRNhsa-miR-5003-3p86.8064NM_139321
ATRNhsa-miR-6783-3p86.8001NM_139321
ATRNhsa-miR-608186.6837NM_139321
ATRNhsa-miR-6828-3p86.4314NM_139321
ATRNhsa-miR-2681-5p86.2357NM_139321
ATRNhsa-miR-55785.9732NM_139321
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Motifs and transcription factors (TFs) regulating ATRN

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ATRNkznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."