DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: ATP2B4

Summary for ATP2B4

Gene informationGene symbol

ATP2B4

Ensembl ID

ENSG00000058668

Entrez ID

493

Gene nameATPase plasma membrane Ca2+ transporting 4
SynonymsATP2B2|MXRA1|PMCA4
Gene typeprotein_coding
UniProtAcc

P23634


Top

Dataset with differentially expressed gene: ATP2B4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.789248.56e-17

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.3329480.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells0.4097830.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.3562540.00e+00

Top

Expression of ATP2B4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to ATP2B4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating ATP2B4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ATP2B4hsa-miR-548b-3p98.2646NM_001684
ATP2B4hsa-miR-548aa97.9079NM_001001396
ATP2B4hsa-miR-548ap-3p97.9079NM_001001396
ATP2B4hsa-miR-548t-3p97.9079NM_001001396
ATP2B4hsa-miR-806897.5091NM_001001396
ATP2B4hsa-miR-3688-3p97.0301NM_001684
ATP2B4hsa-miR-3663-5p97.0138NM_001001396
ATP2B4hsa-miR-6845-3p96.895NM_001684
ATP2B4hsa-miR-183-5p96.7408NM_001001396
ATP2B4hsa-miR-877-3p96.698NM_001001396
ATP2B4hsa-miR-313396.345NM_001001396
ATP2B4hsa-miR-519395.895NM_001001396
ATP2B4hsa-miR-889-5p95.7846NM_001001396
ATP2B4hsa-miR-4747-5p95.4945NM_001684
ATP2B4hsa-miR-5196-5p95.4945NM_001684
ATP2B4hsa-miR-4668-5p95.4494NM_001684
ATP2B4hsa-miR-3065-5p93.2261NM_001684
ATP2B4hsa-miR-5011-5p92.9869NM_001001396
ATP2B4hsa-miR-391992.9068NM_001001396
ATP2B4hsa-miR-4690-5p91.675NM_001684
ATP2B4hsa-miR-5580-3p91.5714NM_001684
ATP2B4hsa-miR-317591.0718NM_001684
ATP2B4hsa-miR-7162-3p91.0464NM_001001396
ATP2B4hsa-miR-6516-5p90.9265NM_001684
ATP2B4hsa-miR-498-3p90.4527NM_001001396
ATP2B4hsa-miR-6757-5p90.0927NM_001684
ATP2B4hsa-miR-480189.3876NM_001684
ATP2B4hsa-miR-4738-3p89.1363NM_001001396
ATP2B4hsa-miR-29b-3p88.5565NM_001001396
ATP2B4hsa-miR-29c-3p88.5565NM_001001396
ATP2B4hsa-miR-29a-3p88.5565NM_001001396
ATP2B4hsa-miR-96-5p88.248NM_001001396
ATP2B4hsa-miR-6741-5p88.2056NM_001684
ATP2B4hsa-miR-1271-5p87.8773NM_001001396
ATP2B4hsa-miR-1213387.8773NM_001001396
ATP2B4hsa-miR-545-3p87.8222NM_001684
ATP2B4hsa-miR-27b-5p87.6904NM_001001396
ATP2B4hsa-miR-320287.4676NM_001684
ATP2B4hsa-miR-6879-5p86.8196NM_001684
ATP2B4hsa-miR-4632-5p86.8196NM_001684
ATP2B4hsa-miR-6735-5p86.8196NM_001684
ATP2B4hsa-miR-4436b-3p86.8196NM_001684
ATP2B4hsa-miR-7843-5p86.8196NM_001684
ATP2B4hsa-miR-767-5p85.9856NM_001001396
ATP2B4hsa-miR-3150a-3p85.6844NM_001684
ATP2B4hsa-miR-6763-5p85.6844NM_001684
ATP2B4hsa-miR-548h-3p85.3091NM_001684
ATP2B4hsa-miR-548ac85.3091NM_001684
ATP2B4hsa-miR-548d-3p85.3091NM_001684
ATP2B4hsa-miR-548bb-3p85.3091NM_001684
Page: 1 2

Top

Motifs and transcription factors (TFs) regulating ATP2B4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ATP2B4transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
ATP2B4transfac_pro__M03876ZBTB33 (directAnnotation).
ATP2B4metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
ATP2B4jaspar__MA1483.2ELF2 (directAnnotation).
ATP2B4taipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
ATP2B4taipale__ELK1_full_NACTTCCGSCGGAARMN_reprELK1 (directAnnotation).
ATP2B4taipale_tf_pairs__HOXB2_ETV1_ACCGGAAATGA_CAPETV1; HOXB2 (directAnnotation).
ATP2B4taipale_tf_pairs__ERF_CEBPD_RSMGGAANTTGCGYAAN_CAPCEBPD; ERF (directAnnotation).
ATP2B4hdpi__GTF3C2GTF3C2 (directAnnotation).
ATP2B4transfac_pro__M07437ZBTB2 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."