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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ATP2B1

Summary for ATP2B1

Gene informationGene symbol

ATP2B1

Ensembl ID

ENSG00000070961

Entrez ID

490

Gene nameATPase plasma membrane Ca2+ transporting 1
SynonymsPMCA1
Gene typeprotein_coding
UniProtAcc

P20020


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Dataset with differentially expressed gene: ATP2B1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.3363770.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.3252593.35e-03

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.2620351.04e-29

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.4626191.05e-02

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD8+ T cells0.5128331.59e-11

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.3688290.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.4068831.68e-20

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.3396621.44e-03

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMono/Macro-0.5107430.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMono/Macro0.4153453.42e-16

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells1.181450.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-2.043240.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.3372984.20e-45

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.5262010.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.6489480.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.7404840.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.3356370.00e+00

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Expression of ATP2B1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ATP2B1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ATP2B1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ATP2B1hsa-miR-426297.8758NM_001001323
ATP2B1hsa-miR-520d-5p96.9019NM_001682
ATP2B1hsa-miR-524-5p96.9019NM_001682
ATP2B1hsa-miR-181d-5p96.412NM_001001323
ATP2B1hsa-miR-181a-5p96.412NM_001001323
ATP2B1hsa-miR-181b-5p96.412NM_001001323
ATP2B1hsa-miR-181c-5p96.412NM_001001323
ATP2B1hsa-miR-330-3p96.1359NM_001001323
ATP2B1hsa-miR-431195.8671NM_001001323
ATP2B1hsa-miR-128394.675NM_001682
ATP2B1hsa-miR-1252-3p94.2852NM_001682
ATP2B1hsa-miR-6806-5p93.877NM_001682
ATP2B1hsa-miR-219a-1-3p93.7114NM_001682
ATP2B1hsa-miR-6733-3p93.4254NM_001001323
ATP2B1hsa-miR-3613-3p92.4005NM_001682
ATP2B1hsa-miR-548an91.6072NM_001001323
ATP2B1hsa-miR-6884-3p91.4087NM_001001323
ATP2B1hsa-miR-582-5p91.3071NM_001001323
ATP2B1hsa-miR-75991.2476NM_001001323
ATP2B1hsa-miR-480391.1924NM_001001323
ATP2B1hsa-miR-365890.7369NM_001682
ATP2B1hsa-miR-4711-5p90.1742NM_001001323
ATP2B1hsa-miR-27b-3p89.647NM_001001323
ATP2B1hsa-miR-27a-3p89.647NM_001001323
ATP2B1hsa-miR-998589.647NM_001001323
ATP2B1hsa-miR-132389.5862NM_001682
ATP2B1hsa-miR-5692a89.48NM_001001323
ATP2B1hsa-miR-4713-3p89.2327NM_001001323
ATP2B1hsa-miR-1252-5p88.5824NM_001001323
ATP2B1hsa-miR-20a-3p88.3936NM_001001323
ATP2B1hsa-miR-144-3p88.2238NM_001682
ATP2B1hsa-miR-6728-5p87.7332NM_001682
ATP2B1hsa-miR-873-5p87.4867NM_001682
ATP2B1hsa-miR-124687.2825NM_001682
ATP2B1hsa-miR-548o-3p87.2547NM_001682
ATP2B1hsa-miR-4482-3p87.021NM_001001323
ATP2B1hsa-miR-338-5p87.0161NM_001001323
ATP2B1hsa-miR-520h86.9769NM_001001323
ATP2B1hsa-miR-520g-3p86.9769NM_001001323
ATP2B1hsa-miR-3667-5p86.9288NM_001682
ATP2B1hsa-miR-442286.8633NM_001001323
ATP2B1hsa-miR-428286.5483NM_001001323
ATP2B1hsa-miR-569386.4995NM_001682
ATP2B1hsa-miR-6740-3p86.43NM_001682
ATP2B1hsa-miR-877-5p86.3559NM_001682
ATP2B1hsa-miR-6835-3p85.9335NM_001001323
ATP2B1hsa-miR-544b85.7256NM_001001323
ATP2B1hsa-miR-6837-5p85.6724NM_001001323
ATP2B1hsa-miR-4685-5p85.6724NM_001001323
ATP2B1hsa-miR-498-3p85.5237NM_001001323
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Motifs and transcription factors (TFs) regulating ATP2B1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ATP2B1metacluster_52.5HSFY1; HSFY1; HSFY1; HSFY2; HSFY2; HSFY2 (directAnnotation).
ATP2B1metacluster_76.1ZNF345; ZNF345 (directAnnotation). MYB; MYBL1 (inferredBy_Orthology).
ATP2B1transfac_pro__M06180ZNF445 (directAnnotation).
ATP2B1hocomoco__GMEB2_HUMAN.H11MO.0.DGMEB2 (directAnnotation).
ATP2B1transfac_pro__M06764ZNF112 (directAnnotation).
ATP2B1transfac_pro__M06159ZNF83 (directAnnotation).
ATP2B1transfac_pro__M06317ZNF829 (directAnnotation).
ATP2B1transfac_pro__M04861SIX5 (directAnnotation).
ATP2B1metacluster_172.23ZBTB32; ZBTB32 (directAnnotation).
ATP2B1hdpi__FLI1FLI1 (directAnnotation).
ATP2B1jaspar__MA0502.2NFYB (directAnnotation).
ATP2B1metacluster_168.4ZNF652 (directAnnotation).
ATP2B1transfac_pro__M06550ZNF519 (directAnnotation).
ATP2B1jaspar__MA1956.1FOXO1 (directAnnotation).
ATP2B1jaspar__MA1954.1FOXO1 (directAnnotation).
ATP2B1jaspar__MA1946.1FOXI1 (directAnnotation).
ATP2B1jaspar__MA1955.1FOXO1 (directAnnotation).
ATP2B1taipale_tf_pairs__TEAD4_SPIB_RGAATGCGGAAGTN_CAP_1SPIB; TEAD4 (directAnnotation).
ATP2B1tfdimers__MD00075FOXO4; NANOG (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."