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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ATP13A2

Summary for ATP13A2

Gene informationGene symbol

ATP13A2

Ensembl ID

ENSG00000159363

Entrez ID

23400

Gene nameATPase cation transporting 13A2
SynonymsCLN12|HSA9947|PARK9
Gene typeprotein_coding
UniProtAcc

Q9NQ11


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Dataset with differentially expressed gene: ATP13A2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postpDCs-0.7536231.07e-04

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro-0.3297927.91e-10

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.5249210.00e+00

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Expression of ATP13A2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ATP13A2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ATP13A2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ATP13A2hsa-miR-199a-5p87.997NM_001141973
ATP13A2hsa-miR-199b-5p87.997NM_001141973
ATP13A2hsa-miR-24-3p87.9383NM_022089
ATP13A2hsa-miR-1233-5p82.5349NM_022089
ATP13A2hsa-miR-6778-5p82.5349NM_022089
Page: 1

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Motifs and transcription factors (TFs) regulating ATP13A2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ATP13A2transfac_pro__M06839ZNF263 (inferredBy_Orthology).
ATP13A2tfdimers__MD00550PITX3; TEAD1 (directAnnotation).
ATP13A2transfac_pro__M06568ZNF501 (directAnnotation).
ATP13A2tfdimers__MD00208IRF1; LTF (directAnnotation).
ATP13A2transfac_pro__M06795ZNF780B (directAnnotation).
ATP13A2transfac_pro__M06252ZNF415 (directAnnotation).
ATP13A2transfac_pro__M06153ZNF83 (directAnnotation).
ATP13A2taipale_tf_pairs__TEAD4_SPDEF_RGWATSCGGATGNNNNTCCKNNN_CAP_reprSPDEF; TEAD4 (directAnnotation).
ATP13A2kznf__ZNF736_Imbeault2017_OM_RCADEZNF736 (directAnnotation).
ATP13A2tfdimers__MD00502PBX1; SOX9 (directAnnotation).
ATP13A2tfdimers__MD00599NR1I2; RXRA; STAT1 (directAnnotation).
ATP13A2taipale_tf_pairs__TEAD4_HOXA13_RCATWCCNNNNNNNNYNNTAAA_CAP_reprHOXA13; TEAD4 (directAnnotation).
ATP13A2transfac_pro__M06127ZSCAN22 (directAnnotation).
ATP13A2transfac_pro__M04906SIN3A (directAnnotation).
ATP13A2transfac_pro__M05827ZNF544 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."