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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ATG12

Summary for ATG12

Gene informationGene symbol

ATG12

Ensembl ID

ENSG00000145782

Entrez ID

9140

Gene nameautophagy related 12
SynonymsAPG12|APG12L
Gene typeprotein_coding
UniProtAcc

O94817


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Dataset with differentially expressed gene: ATG12

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.2924540.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.285010.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.2771064.97e-27

GSE164897_Vem

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenibNAMalignant cells0.6281630.00e+00

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Expression of ATG12 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ATG12

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

ATG12

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating ATG12

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ATG12hsa-miR-4684-3p97.2056NM_004707
ATG12hsa-miR-30b-5p97.0382NM_004707
ATG12hsa-miR-30a-5p97.0382NM_004707
ATG12hsa-miR-30e-5p97.0382NM_004707
ATG12hsa-miR-30d-5p97.0382NM_004707
ATG12hsa-miR-30c-5p97.0382NM_004707
ATG12hsa-miR-130595.4394NM_004707
ATG12hsa-miR-4474-5p92.5433NM_004707
ATG12hsa-miR-365491.695NM_004707
ATG12hsa-miR-545-5p90.8193NM_004707
ATG12hsa-miR-316390.3795NM_001277783
ATG12hsa-miR-4704-3p88.6033NM_004707
ATG12hsa-miR-316987.7658NM_004707
ATG12hsa-miR-125887.2578NM_004707
ATG12hsa-miR-512-5p86.7133NM_004707
ATG12hsa-miR-4740-5p85.941NM_001277783
ATG12hsa-miR-19885.7929NM_004707
ATG12hsa-miR-182784.3456NM_004707
ATG12hsa-miR-4712-3p83.9481NM_004707
ATG12hsa-miR-118483.1241NM_004707
ATG12hsa-miR-570-3p82.9844NM_004707
ATG12hsa-miR-642b-3p82.3029NM_001277783
ATG12hsa-miR-642a-3p82.3029NM_001277783
ATG12hsa-miR-23a-3p81.9554NM_004707
ATG12hsa-miR-23b-3p81.9554NM_004707
ATG12hsa-miR-23c81.9554NM_004707
ATG12hsa-miR-125781.2558NM_004707
ATG12hsa-miR-32580.9756NM_004707
ATG12hsa-miR-556-5p80.7359NM_004707
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Motifs and transcription factors (TFs) regulating ATG12

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ATG12dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
ATG12metacluster_50.1BATF; BATF; BATF; BATF; BNC2; FOS; FOSB; FOSL1; FOSL1; IRF4; JUN; JUN; JUNB; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; SMAD2; SMAD3 (directAnnotation). BATF; BATF; BATF; FOS; FOSL1; FOSL2; JDP2; JUN; JUN; JUND (inferredBy_Orthology).
ATG12transfac_pro__M06854ZNF600 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."