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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ARMCX3

Summary for ARMCX3

Gene informationGene symbol

ARMCX3

Ensembl ID

ENSG00000102401

Entrez ID

51566

Gene namearmadillo repeat containing X-linked 3
SynonymsALEX3|GASP6
Gene typeprotein_coding
UniProtAcc

Q9UH62


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Dataset with differentially expressed gene: ARMCX3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.2796090.00e+00

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.2681991.49e-04

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.4995840.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.4980670.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2879173.50e-05

GSE104987

MCF7 cell lineCell lineBreast cancerER+ breast cancerTargeted therapyKDM5-C70NAMalignant cells-0.3354055.35e-05

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Expression of ARMCX3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ARMCX3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ARMCX3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ARMCX3hsa-miR-3682-3p97.9998NM_016607
ARMCX3hsa-miR-6875-3p95.0932NM_016607
ARMCX3hsa-miR-664a-3p94.4093NM_016607
ARMCX3hsa-miR-4659a-3p93.2657NM_016607
ARMCX3hsa-miR-4659b-3p93.2657NM_016607
ARMCX3hsa-miR-660-5p90.832NM_016607
ARMCX3hsa-miR-430790.6955NM_016607
ARMCX3hsa-miR-4474-5p89.4785NM_016607
ARMCX3hsa-miR-6773-3p89.1854NM_016607
ARMCX3hsa-miR-1213689.012NM_016607
ARMCX3hsa-miR-6760-3p88.8701NM_016607
ARMCX3hsa-miR-6754-3p88.4438NM_016607
ARMCX3hsa-miR-338-3p88.2885NM_016607
ARMCX3hsa-miR-6880-5p87.9528NM_016607
ARMCX3hsa-miR-607487.816NM_016607
ARMCX3hsa-miR-885-3p87.6543NM_016607
ARMCX3hsa-miR-628-3p86.003NM_016607
ARMCX3hsa-miR-589-3p85.8214NM_016607
ARMCX3hsa-miR-7157-5p85.6329NM_016607
ARMCX3hsa-miR-807385.5233NM_016607
ARMCX3hsa-miR-221-5p85.5233NM_016607
ARMCX3hsa-miR-29885.3146NM_016607
ARMCX3hsa-miR-431085.0504NM_016607
ARMCX3hsa-miR-371b-5p83.096NM_016607
ARMCX3hsa-miR-373-5p83.096NM_016607
ARMCX3hsa-miR-616-5p83.096NM_016607
ARMCX3hsa-miR-412-3p82.7323NM_016607
ARMCX3hsa-miR-3117-5p81.771NM_016607
ARMCX3hsa-miR-3617-3p81.4346NM_016607
ARMCX3hsa-miR-1212381.1351NM_016607
ARMCX3hsa-miR-548y80.4691NM_016607
ARMCX3hsa-miR-548h-5p80.4691NM_016607
ARMCX3hsa-miR-548b-5p80.4691NM_016607
ARMCX3hsa-miR-548au-5p80.4691NM_016607
ARMCX3hsa-miR-548w80.4691NM_016607
ARMCX3hsa-miR-548ar-5p80.4691NM_016607
ARMCX3hsa-miR-548bb-5p80.4691NM_016607
ARMCX3hsa-miR-548c-5p80.4691NM_016607
ARMCX3hsa-miR-55980.4691NM_016607
ARMCX3hsa-miR-548ap-5p80.4691NM_016607
ARMCX3hsa-miR-548ak80.4691NM_016607
ARMCX3hsa-miR-548ab80.4691NM_016607
ARMCX3hsa-miR-548ad-5p80.4691NM_016607
ARMCX3hsa-miR-548i80.4691NM_016607
ARMCX3hsa-miR-548j-5p80.4691NM_016607
ARMCX3hsa-miR-548as-5p80.4691NM_016607
ARMCX3hsa-miR-548ay-5p80.4691NM_016607
ARMCX3hsa-miR-548a-5p80.4691NM_016607
ARMCX3hsa-miR-548am-5p80.4691NM_016607
ARMCX3hsa-miR-548aq-5p80.4691NM_016607
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Motifs and transcription factors (TFs) regulating ARMCX3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ARMCX3taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
ARMCX3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ARMCX3transfac_pro__M07397ZNF148 (directAnnotation).
ARMCX3metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
ARMCX3metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
ARMCX3taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
ARMCX3metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
ARMCX3metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
ARMCX3homer__GGGGGGGG_MazMAZ (directAnnotation).
ARMCX3transfac_pro__M01175ZBTB7B (directAnnotation).
ARMCX3taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
ARMCX3tfdimers__MD00151CHURC1 (directAnnotation).
ARMCX3metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
ARMCX3transfac_pro__M01303SP1 (directAnnotation).
ARMCX3transfac_pro__M01714KLF15 (directAnnotation).
ARMCX3hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
ARMCX3metacluster_3.14WT1; WT1 (directAnnotation).
ARMCX3metacluster_126.3LIN28B; LIN28B (directAnnotation).
ARMCX3hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
ARMCX3metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
ARMCX3homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
ARMCX3transfac_pro__M07436WT1 (directAnnotation).
ARMCX3transfac_pro__M02281SP1 (directAnnotation).
ARMCX3transfac_public__M00491PATZ1 (directAnnotation).
ARMCX3transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
ARMCX3metacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
ARMCX3transfac_pro__M01861ATF1 (directAnnotation).
ARMCX3transfac_pro__M04826EP300 (directAnnotation).
ARMCX3metacluster_81.7CREB1 (directAnnotation).
ARMCX3metacluster_2.7IRF1; IRF1; IRF2; IRF2; IRF3; IRF4; IRF5; IRF6; IRF7; IRF7; IRF8; IRF8; IRF9; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; STAT1; STAT1; STAT2 (directAnnotation). PRDM1; PRDM1; PRDM1 (inferredBy_Orthology).
ARMCX3jaspar__MA0604.1ATF1 (inferredBy_Orthology).
ARMCX3transfac_pro__M06063ZNF99 (directAnnotation).
ARMCX3cisbp__M01725SREBF2 (inferredBy_Orthology).
ARMCX3metacluster_57.2BACH1; MITF; MITF; TFE3; TFE3; TFE3; TFEB; USF2 (directAnnotation). MITF; TFE3; USF1; USF2 (inferredBy_Orthology).
ARMCX3metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
ARMCX3homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
ARMCX3transfac_pro__M07329SP7 (directAnnotation).
ARMCX3metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
ARMCX3transfac_pro__M01837KLF11 (directAnnotation).
ARMCX3transfac_pro__M02844BCL6B (inferredBy_Orthology).
ARMCX3swissregulon__hs__KLF6KLF6 (directAnnotation).
ARMCX3metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."