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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ARID3B

Summary for ARID3B

Gene informationGene symbol

ARID3B

Ensembl ID

ENSG00000179361

Entrez ID

10620

Gene nameAT-rich interaction domain 3B
SynonymsBDP|DRIL2
Gene typeprotein_coding
UniProtAcc

Q8IVW6


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Dataset with differentially expressed gene: ARID3B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.3570570.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.2554840.00e+00

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Expression of ARID3B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ARID3B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ARID3B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ARID3Bhsa-miR-6867-5p99.9986NM_001307939
ARID3Bhsa-miR-7162-3p99.8902NM_001307939
ARID3Bhsa-miR-450099.8838NM_001307939
ARID3Bhsa-let-7i-5p99.8019NM_001307939
ARID3Bhsa-miR-431999.7552NM_001307939
ARID3Bhsa-let-7g-5p99.7229NM_001307939
ARID3Bhsa-let-7b-5p99.7229NM_001307939
ARID3Bhsa-let-7f-5p99.6761NM_001307939
ARID3Bhsa-let-7a-5p99.6761NM_001307939
ARID3Bhsa-let-7c-5p99.6761NM_001307939
ARID3Bhsa-let-7e-5p99.6761NM_001307939
ARID3Bhsa-miR-98-5p99.6761NM_001307939
ARID3Bhsa-miR-202-3p99.6121NM_001307939
ARID3Bhsa-let-7d-5p99.3705NM_001307939
ARID3Bhsa-miR-445899.3705NM_001307939
ARID3Bhsa-miR-125b-5p99.3602NM_001307939
ARID3Bhsa-miR-125a-5p99.3602NM_001307939
ARID3Bhsa-miR-1211998.487NM_001307939
ARID3Bhsa-miR-3190-5p98.0596NM_001307939
ARID3Bhsa-miR-4649-3p97.8464NM_001307939
ARID3Bhsa-miR-6825-5p96.7391NM_001307939
ARID3Bhsa-miR-874-5p96.1018NM_001307939
ARID3Bhsa-miR-449295.6194NM_001307939
ARID3Bhsa-miR-4731-5p93.6004NM_001307939
ARID3Bhsa-miR-4700-5p93.0786NM_001307939
ARID3Bhsa-miR-808992.7401NM_001307939
ARID3Bhsa-miR-4758-3p92.7075NM_001307939
ARID3Bhsa-miR-76292.6476NM_001307939
ARID3Bhsa-miR-467892.6258NM_001307939
ARID3Bhsa-miR-4667-5p91.8471NM_001307939
ARID3Bhsa-miR-939-5p91.6875NM_001307939
ARID3Bhsa-miR-7110-5p91.3066NM_001307939
ARID3Bhsa-miR-6842-5p91.3066NM_001307939
ARID3Bhsa-miR-1343-5p91.0118NM_001307939
ARID3Bhsa-miR-449890.9885NM_001307939
ARID3Bhsa-miR-670-5p90.8655NM_001307939
ARID3Bhsa-miR-465690.7736NM_001307939
ARID3Bhsa-miR-6780b-5p89.6075NM_001307939
ARID3Bhsa-miR-129189.5327NM_001307939
ARID3Bhsa-miR-1249-5p88.9653NM_001307939
ARID3Bhsa-miR-6797-5p88.9653NM_001307939
ARID3Bhsa-miR-4446-3p88.6369NM_001307939
ARID3Bhsa-miR-5001-5p88.3026NM_001307939
ARID3Bhsa-miR-6775-3p88.1376NM_001307939
ARID3Bhsa-miR-3194-3p88.0817NM_001307939
ARID3Bhsa-miR-4725-3p87.9675NM_001307939
ARID3Bhsa-miR-545-3p87.7887NM_001307939
ARID3Bhsa-miR-4677-3p87.4974NM_001307939
ARID3Bhsa-miR-6752-5p87.2745NM_001307939
ARID3Bhsa-miR-365b-5p86.7818NM_001307939
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Motifs and transcription factors (TFs) regulating ARID3B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ARID3Btaipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
ARID3Bmetacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
ARID3Btaipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
ARID3Bkznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
ARID3Btaipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
ARID3Bmetacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
ARID3Bmetacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
ARID3Bmetacluster_3.14WT1; WT1 (directAnnotation).
ARID3Bswissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
ARID3Bcisbp__M07938E2F1 (directAnnotation).
ARID3Bmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
ARID3Bcisbp__M00249WT1 (directAnnotation).
ARID3Bmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
ARID3Btransfac_pro__M01122ZNF219 (directAnnotation).
ARID3Bmetacluster_151.2ZNF23 (directAnnotation).
ARID3Btaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
ARID3Btaipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
ARID3Bdbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
ARID3Bmetacluster_7.13ZFX (directAnnotation).
ARID3Bkznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
ARID3Btaipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
ARID3Btaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
ARID3Bkznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
ARID3Bmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
ARID3Bhomer__GGGGGGGG_MazMAZ (directAnnotation).
ARID3Btaipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
ARID3Bkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
ARID3Btaipale_tf_pairs__GCM1_ERG_RTRYGGGCGGAARKN_CAPERG; GCM1 (directAnnotation).
ARID3Btransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ARID3Bmetacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
ARID3Btransfac_pro__M01253CNOT3 (directAnnotation).
ARID3Bdbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
ARID3Bmetacluster_3.10KLF2; KLF4 (directAnnotation).
ARID3Bmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
ARID3Bjaspar__MA1721.1ZNF93 (directAnnotation).
ARID3Bswissregulon__hs__CHD1CHD1 (directAnnotation).
ARID3Btransfac_pro__M05479ZNF580 (directAnnotation).
ARID3Bjaspar__MA1122.1TFDP1 (directAnnotation).
ARID3Bcisbp__M00341PAX6 (directAnnotation).
ARID3Btransfac_pro__M01199TRIM28 (directAnnotation).
ARID3Bmetacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
ARID3Bmetacluster_35.2EGR1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF3; ELF4; ELF4; ELK1; ELK3; ELK4; ERG; ETS1; ETS1; ETS2; ETV1; ETV1; ETV5; ETV5; ETV6; FLI1; FLI1; GABPA; GABPA; GABPA; GABPB1; GABPB1; GABPB1; ZBTB7A (directAnnotation). ELF2; ELF2; ERG; ERG; ETS2; FLI1; GABPA; IKZF3; SPIC (inferredBy_Orthology).
ARID3Btfdimers__MD00151CHURC1 (directAnnotation).
ARID3Btfdimers__MD00391KLF4 (directAnnotation).
ARID3Btaipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
ARID3Btaipale_tf_pairs__GCM2_ELK1_NNRNGGGCGGAARTN_CAPELK1; GCM2 (directAnnotation).
ARID3Bmetacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
ARID3Bmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
ARID3Bmetacluster_126.3LIN28B; LIN28B (directAnnotation).
ARID3Bcisbp__M00968MTF2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."