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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ARHGEF12

Summary for ARHGEF12

Gene informationGene symbol

ARHGEF12

Ensembl ID

ENSG00000196914

Entrez ID

23365

Gene nameRho guanine nucleotide exchange factor 12
SynonymsKIAA0382|LARG
Gene typeprotein_coding
UniProtAcc

Q9NZN5


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Dataset with differentially expressed gene: ARHGEF12

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.8322481.34e-04

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3609250.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes0.2587542.90e-23

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreErythrocytes0.3527552.69e-08

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6720920.00e+00

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Expression of ARHGEF12 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ARHGEF12

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ARHGEF12

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ARHGEF12hsa-miR-548c-3p98.6601NM_001198665
ARHGEF12hsa-miR-5011-5p98.4186NM_001198665
ARHGEF12hsa-miR-190a-3p98.2502NM_001198665
ARHGEF12hsa-miR-469894.9716NM_001198665
ARHGEF12hsa-miR-5187-3p94.207NM_001198665
ARHGEF12hsa-miR-428293.7428NM_001198665
ARHGEF12hsa-miR-9851-3p93.3191NM_001198665
ARHGEF12hsa-miR-545-5p92.549NM_001198665
ARHGEF12hsa-miR-508-3p91.9613NM_001198665
ARHGEF12hsa-miR-593-5p91.6191NM_001198665
ARHGEF12hsa-miR-607391.1258NM_001198665
ARHGEF12hsa-miR-314890.9618NM_001198665
ARHGEF12hsa-miR-659-3p90.3281NM_001198665
ARHGEF12hsa-miR-60789.9881NM_001198665
ARHGEF12hsa-miR-193a-3p89.9591NM_001198665
ARHGEF12hsa-miR-193b-3p89.9591NM_001198665
ARHGEF12hsa-miR-148a-3p89.7124NM_001198665
ARHGEF12hsa-miR-148b-3p89.7124NM_001198665
ARHGEF12hsa-miR-152-3p89.7124NM_001198665
ARHGEF12hsa-miR-127689.1813NM_001198665
ARHGEF12hsa-miR-128489.0154NM_001198665
ARHGEF12hsa-miR-4477a88.338NM_001198665
ARHGEF12hsa-miR-3180-5p88.2523NM_001198665
ARHGEF12hsa-miR-430387.6902NM_001198665
ARHGEF12hsa-miR-570-3p87.4029NM_001198665
ARHGEF12hsa-miR-4652-3p86.6443NM_001198665
ARHGEF12hsa-miR-96-5p86.5381NM_001198665
ARHGEF12hsa-miR-7-2-3p86.0773NM_001198665
ARHGEF12hsa-miR-7-1-3p86.0773NM_001198665
ARHGEF12hsa-miR-146a-3p85.753NM_001198665
ARHGEF12hsa-miR-488-5p85.4603NM_001198665
ARHGEF12hsa-miR-391985.4354NM_001198665
ARHGEF12hsa-miR-4782-5p85.3814NM_001198665
ARHGEF12hsa-miR-570685.3814NM_001198665
ARHGEF12hsa-miR-1213385.0715NM_001198665
ARHGEF12hsa-miR-1271-5p85.0715NM_001198665
ARHGEF12hsa-miR-4760-3p84.5268NM_001198665
ARHGEF12hsa-miR-429184.0297NM_001198665
ARHGEF12hsa-miR-367183.7268NM_001198665
ARHGEF12hsa-miR-317683.2628NM_001198665
ARHGEF12hsa-miR-3922-3p83.2628NM_001198665
ARHGEF12hsa-miR-5002-5p82.9089NM_001198665
ARHGEF12hsa-miR-525-5p82.8276NM_001198665
ARHGEF12hsa-miR-520a-5p82.8276NM_001198665
ARHGEF12hsa-miR-4793-5p82.575NM_001198665
ARHGEF12hsa-miR-990282.5633NM_001198665
ARHGEF12hsa-miR-452282.4099NM_001198665
ARHGEF12hsa-miR-4789-5p82.2456NM_001198665
ARHGEF12hsa-miR-392682.1792NM_001198665
ARHGEF12hsa-miR-6765-3p81.7858NM_001198665
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Motifs and transcription factors (TFs) regulating ARHGEF12

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ARHGEF12kznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
ARHGEF12transfac_pro__M05788ZNF569 (inferredBy_Orthology).
ARHGEF12metacluster_52.11ZNF184 (directAnnotation).
ARHGEF12kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
ARHGEF12taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
ARHGEF12transfac_pro__M00716ZBTB14 (directAnnotation).
ARHGEF12swissregulon__hs__CHD1CHD1 (directAnnotation).
ARHGEF12transfac_pro__M04893TAF1 (directAnnotation).
ARHGEF12transfac_pro__M03876ZBTB33 (directAnnotation).
ARHGEF12metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
ARHGEF12transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ARHGEF12metacluster_135.11NR2C2 (directAnnotation).
ARHGEF12metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
ARHGEF12metacluster_144.3ZNF704; ZNF704 (directAnnotation).
ARHGEF12metacluster_7.13ZFX (directAnnotation).
ARHGEF12cisbp__M00968MTF2 (directAnnotation).
ARHGEF12metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
ARHGEF12metacluster_160.20JUND; PRDM15 (directAnnotation).
ARHGEF12cisbp__M00341PAX6 (directAnnotation).
ARHGEF12metacluster_198.3ZFP64 (directAnnotation).
ARHGEF12metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
ARHGEF12jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
ARHGEF12metacluster_61.1DEAF1; DEAF1 (directAnnotation).
ARHGEF12cisbp__M00788ZFY (inferredBy_Orthology).
ARHGEF12hdpi__ZNF304ZNF304 (directAnnotation).
ARHGEF12transfac_pro__M01199TRIM28 (directAnnotation).
ARHGEF12transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
ARHGEF12transfac_pro__M03806ZBTB7C (directAnnotation).
ARHGEF12transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
ARHGEF12taipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
ARHGEF12transfac_pro__M01968FOXO1 (directAnnotation).
ARHGEF12taipale_tf_pairs__ERF_HES7_NCCGGAANNNNNNCACGYGNN_CAP_reprERF; HES7 (directAnnotation).
ARHGEF12taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
ARHGEF12jaspar__MA1122.1TFDP1 (directAnnotation).
ARHGEF12taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
ARHGEF12metacluster_198.7AHR; ZBTB14; ZBTB14; ZBTB14 (directAnnotation).
ARHGEF12kznf__ZNF846_Imbeault2017_OM_MEMEZNF846 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."