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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ARHGAP29

Summary for ARHGAP29

Gene informationGene symbol

ARHGAP29

Ensembl ID

ENSG00000137962

Entrez ID

9411

Gene nameRho GTPase activating protein 29
SynonymsPARG1
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: ARHGAP29

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.5482744.41e-43

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.5108140.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.8106410.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.4821560.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.8084220.00e+00

GSE164897_Vem

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenibNAMalignant cells0.8588880.00e+00

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Expression of ARHGAP29 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ARHGAP29

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ARHGAP29

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ARHGAP29hsa-miR-5011-5p99.9144NM_004815
ARHGAP29hsa-miR-316399.8066NM_004815
ARHGAP29hsa-miR-548x-3p99.3847NM_004815
ARHGAP29hsa-miR-548aj-3p99.3847NM_004815
ARHGAP29hsa-miR-806599.1857NM_004815
ARHGAP29hsa-miR-548ae-3p98.8592NM_004815
ARHGAP29hsa-miR-548aq-3p98.8592NM_004815
ARHGAP29hsa-miR-548j-3p98.6754NM_004815
ARHGAP29hsa-miR-548ah-3p98.6754NM_004815
ARHGAP29hsa-miR-548am-3p98.6754NM_004815
ARHGAP29hsa-miR-190a-3p97.7039NM_004815
ARHGAP29hsa-miR-366295.9103NM_004815
ARHGAP29hsa-miR-500a-3p95.8608NM_004815
ARHGAP29hsa-miR-548e-5p94.7648NM_004815
ARHGAP29hsa-miR-431694.5997NM_004815
ARHGAP29hsa-miR-548c-3p94.5641NM_004815
ARHGAP29hsa-miR-548as-3p93.5644NM_004815
ARHGAP29hsa-miR-1250-3p91.5045NM_004815
ARHGAP29hsa-miR-132391.1856NM_004815
ARHGAP29hsa-miR-449590.862NM_004815
ARHGAP29hsa-miR-7159-3p90.4972NM_004815
ARHGAP29hsa-miR-513c-3p90.3427NM_004815
ARHGAP29hsa-miR-513a-3p90.3427NM_004815
ARHGAP29hsa-miR-224-3p88.6831NM_004815
ARHGAP29hsa-miR-522-3p88.6831NM_004815
ARHGAP29hsa-miR-92a-2-5p88.483NM_004815
ARHGAP29hsa-miR-6835-3p88.4009NM_004815
ARHGAP29hsa-miR-548o-3p87.9096NM_004815
ARHGAP29hsa-miR-3619-3p87.3624NM_004815
ARHGAP29hsa-miR-182787.0513NM_004815
ARHGAP29hsa-miR-3606-3p86.9603NM_004815
ARHGAP29hsa-miR-3529-3p86.6117NM_004815
ARHGAP29hsa-miR-494-5p86.3849NM_004815
ARHGAP29hsa-miR-410-5p86.3849NM_004815
ARHGAP29hsa-miR-323b-5p86.3849NM_004815
ARHGAP29hsa-miR-5582-5p86.1068NM_004815
ARHGAP29hsa-miR-4776-5p85.9011NM_004815
ARHGAP29hsa-miR-367285.4129NM_004815
ARHGAP29hsa-miR-6864-3p85.4129NM_004815
ARHGAP29hsa-miR-548h-3p84.6422NM_004815
ARHGAP29hsa-miR-548z84.6422NM_004815
ARHGAP29hsa-miR-410-3p83.582NM_004815
ARHGAP29hsa-miR-561-3p83.5665NM_004815
ARHGAP29hsa-miR-519a-3p83.0157NM_004815
ARHGAP29hsa-miR-519b-3p83.0157NM_004815
ARHGAP29hsa-miR-519c-3p83.0157NM_004815
ARHGAP29hsa-miR-548bb-3p82.9756NM_004815
ARHGAP29hsa-miR-548ac82.9366NM_004815
ARHGAP29hsa-miR-3190-5p82.7706NM_004815
ARHGAP29hsa-miR-426382.6157NM_004815
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Motifs and transcription factors (TFs) regulating ARHGAP29

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ARHGAP29taipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
ARHGAP29taipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
ARHGAP29taipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
ARHGAP29transfac_pro__M06156ZNF75D (directAnnotation).
ARHGAP29metacluster_198.7AHR; ZBTB14; ZBTB14; ZBTB14 (directAnnotation).
ARHGAP29hdpi__FLI1FLI1 (directAnnotation).
ARHGAP29metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
ARHGAP29taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
ARHGAP29taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
ARHGAP29taipale_tf_pairs__ERF_HES7_NNCACGTGNNNNCCGGAANN_CAP_reprERF; HES7 (directAnnotation).
ARHGAP29metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
ARHGAP29taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
ARHGAP29transfac_pro__M00652NRF1 (directAnnotation).
ARHGAP29taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
ARHGAP29transfac_pro__M04866HDAC2 (directAnnotation).
ARHGAP29jaspar__MA1122.1TFDP1 (directAnnotation).
ARHGAP29swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
ARHGAP29metacluster_135.11NR2C2 (directAnnotation).
ARHGAP29metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
ARHGAP29metacluster_144.3ZNF704; ZNF704 (directAnnotation).
ARHGAP29metacluster_7.13ZFX (directAnnotation).
ARHGAP29kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
ARHGAP29cisbp__M00968MTF2 (directAnnotation).
ARHGAP29metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
ARHGAP29metacluster_160.20JUND; PRDM15 (directAnnotation).
ARHGAP29cisbp__M00341PAX6 (directAnnotation).
ARHGAP29metacluster_198.3ZFP64 (directAnnotation).
ARHGAP29metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
ARHGAP29metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
ARHGAP29jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
ARHGAP29metacluster_61.1DEAF1; DEAF1 (directAnnotation).
ARHGAP29cisbp__M00788ZFY (inferredBy_Orthology).
ARHGAP29metacluster_175.1ZNF283 (directAnnotation).
ARHGAP29hdpi__ZNF304ZNF304 (directAnnotation).
ARHGAP29transfac_pro__M02844BCL6B (inferredBy_Orthology).
ARHGAP29metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
ARHGAP29metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
ARHGAP29transfac_pro__M01199TRIM28 (directAnnotation).
ARHGAP29kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
ARHGAP29metacluster_151.2ZNF23 (directAnnotation).
ARHGAP29transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
ARHGAP29transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ARHGAP29transfac_pro__M03806ZBTB7C (directAnnotation).
ARHGAP29transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
ARHGAP29jaspar__MA0502.2NFYB (directAnnotation).
ARHGAP29metacluster_144.8ZNF30; ZNF30 (directAnnotation).
ARHGAP29transfac_pro__M04918EGR1 (directAnnotation).
ARHGAP29tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
ARHGAP29cisbp__M01863ZNF711 (inferredBy_Orthology).
ARHGAP29taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."