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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ARFGEF2

Summary for ARFGEF2

Gene informationGene symbol

ARFGEF2

Ensembl ID

ENSG00000124198

Entrez ID

10564

Gene nameADP ribosylation factor guanine nucleotide exchange factor 2
SynonymsBIG2
Gene typeprotein_coding
UniProtAcc

Q9Y6D5


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Dataset with differentially expressed gene: ARFGEF2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.7966666.15e-05

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.3270890.00e+00

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Expression of ARFGEF2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ARFGEF2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ARFGEF2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ARFGEF2hsa-miR-9-5p99.8001NM_006420
ARFGEF2hsa-miR-428299.2064NM_006420
ARFGEF2hsa-miR-335-3p98.6029NM_006420
ARFGEF2hsa-miR-590-3p98.2835NM_006420
ARFGEF2hsa-miR-3180-5p97.621NM_006420
ARFGEF2hsa-miR-561-5p97.2309NM_006420
ARFGEF2hsa-miR-1185-1-3p96.2003NM_006420
ARFGEF2hsa-miR-1185-2-3p96.2003NM_006420
ARFGEF2hsa-let-7f-2-3p96.1106NM_006420
ARFGEF2hsa-miR-376c-3p94.3467NM_006420
ARFGEF2hsa-miR-196a-1-3p94.1216NM_006420
ARFGEF2hsa-let-7b-3p93.3583NM_006420
ARFGEF2hsa-let-7a-3p93.3583NM_006420
ARFGEF2hsa-miR-98-3p93.3583NM_006420
ARFGEF2hsa-let-7f-1-3p93.3583NM_006420
ARFGEF2hsa-miR-4789-5p93.3583NM_006420
ARFGEF2hsa-miR-129992.8098NM_006420
ARFGEF2hsa-miR-302c-5p92.6495NM_006420
ARFGEF2hsa-miR-684491.6052NM_006420
ARFGEF2hsa-miR-445191.5743NM_006420
ARFGEF2hsa-miR-46690.2512NM_006420
ARFGEF2hsa-miR-124-3p89.9174NM_006420
ARFGEF2hsa-miR-506-3p89.9174NM_006420
ARFGEF2hsa-miR-63389.5977NM_006420
ARFGEF2hsa-miR-432589.3724NM_006420
ARFGEF2hsa-miR-428988.8806NM_006420
ARFGEF2hsa-miR-2115-3p88.1831NM_006420
ARFGEF2hsa-miR-488-5p87.7734NM_006420
ARFGEF2hsa-let-7c-3p87.7184NM_006420
ARFGEF2hsa-miR-3529-3p86.876NM_006420
ARFGEF2hsa-miR-1211986.7477NM_006420
ARFGEF2hsa-miR-6499-3p86.4388NM_006420
ARFGEF2hsa-miR-6815-5p86.11NM_006420
ARFGEF2hsa-miR-6865-5p86.11NM_006420
ARFGEF2hsa-miR-442285.3946NM_006420
ARFGEF2hsa-miR-5582-3p84.8315NM_006420
ARFGEF2hsa-miR-875-3p84.3805NM_006420
ARFGEF2hsa-miR-7856-5p83.9772NM_006420
ARFGEF2hsa-miR-659-3p83.5237NM_006420
ARFGEF2hsa-miR-29b-2-5p83.3462NM_006420
ARFGEF2hsa-miR-127681.8903NM_006420
ARFGEF2hsa-miR-5007-3p81.5762NM_006420
ARFGEF2hsa-miR-548c-3p81.5138NM_006420
ARFGEF2hsa-miR-330-3p81.4902NM_006420
ARFGEF2hsa-miR-4790-3p81.1686NM_006420
ARFGEF2hsa-miR-315380.685NM_006420
ARFGEF2hsa-miR-1250-3p80.0802NM_006420
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Motifs and transcription factors (TFs) regulating ARFGEF2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ARFGEF2kznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
ARFGEF2kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
ARFGEF2metacluster_144.8ZNF30; ZNF30 (directAnnotation).
ARFGEF2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
ARFGEF2metacluster_144.3ZNF704; ZNF704 (directAnnotation).
ARFGEF2metacluster_151.2ZNF23 (directAnnotation).
ARFGEF2flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
ARFGEF2jaspar__MA0748.2YY2 (directAnnotation).
ARFGEF2kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
ARFGEF2hocomoco__XBP1_HUMAN.H11MO.0.DXBP1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."