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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ARF3

Summary for ARF3

Gene informationGene symbol

ARF3

Ensembl ID

ENSG00000134287

Entrez ID

377

Gene nameADP ribosylation factor 3
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P61204


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Dataset with differentially expressed gene: ARF3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3636345.19e-25

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.3970783.42e-24

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4044783.44e-33

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Expression of ARF3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ARF3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ARF3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ARF3hsa-miR-6716-5p96.5317NM_001659
ARF3hsa-miR-998593.5458NM_001659
ARF3hsa-miR-27b-3p93.5458NM_001659
ARF3hsa-miR-27a-3p93.5458NM_001659
ARF3hsa-miR-848592.8329NM_001659
ARF3hsa-miR-6721-5p92.3686NM_001659
ARF3hsa-miR-430692.3601NM_001659
ARF3hsa-miR-805592.2758NM_001659
ARF3hsa-miR-6808-5p92.1036NM_001659
ARF3hsa-miR-1-3p91.2252NM_001659
ARF3hsa-miR-20691.2252NM_001659
ARF3hsa-miR-5000-3p90.9843NM_001659
ARF3hsa-miR-6893-5p89.8866NM_001659
ARF3hsa-miR-94089.8866NM_001659
ARF3hsa-miR-61389.7043NM_001659
ARF3hsa-miR-3120-3p88.9791NM_001659
ARF3hsa-miR-518688.0057NM_001659
ARF3hsa-miR-92a-2-5p87.2921NM_001659
ARF3hsa-miR-7113-5p87.0612NM_001659
ARF3hsa-miR-6766-5p86.9986NM_001659
ARF3hsa-miR-6756-5p86.9986NM_001659
ARF3hsa-miR-6758-5p86.9417NM_001659
ARF3hsa-miR-6856-5p86.6948NM_001659
ARF3hsa-miR-4436a86.5822NM_001659
ARF3hsa-miR-444186.2189NM_001659
ARF3hsa-miR-4802-3p86.1295NM_001659
ARF3hsa-miR-185-5p85.4491NM_001659
ARF3hsa-miR-464485.4491NM_001659
ARF3hsa-miR-448185.1968NM_001659
ARF3hsa-miR-6830-5p84.5249NM_001659
ARF3hsa-miR-216a-3p84.3863NM_001659
ARF3hsa-miR-128-3p84.3863NM_001659
ARF3hsa-miR-4733-5p83.6969NM_001659
ARF3hsa-miR-1213683.5644NM_001659
ARF3hsa-miR-364683.1913NM_001659
ARF3hsa-miR-315482.8767NM_001659
ARF3hsa-miR-651-3p82.8759NM_001659
ARF3hsa-miR-3681-3p82.5202NM_001659
ARF3hsa-miR-4745-5p82.4569NM_001659
ARF3hsa-miR-6796-5p81.763NM_001659
ARF3hsa-miR-6511b-3p81.6926NM_001659
ARF3hsa-miR-6511a-3p81.6926NM_001659
ARF3hsa-miR-426181.6299NM_001659
ARF3hsa-miR-6862-5p80.3516NM_001659
ARF3hsa-miR-425380.3516NM_001659
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Motifs and transcription factors (TFs) regulating ARF3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ARF3kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
ARF3cisbp__M00341PAX6 (directAnnotation).
ARF3metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
ARF3transfac_pro__M02844BCL6B (inferredBy_Orthology).
ARF3metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
ARF3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ARF3transfac_pro__M03806ZBTB7C (directAnnotation).
ARF3tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
ARF3cisbp__M00249WT1 (directAnnotation).
ARF3taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
ARF3homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
ARF3taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."