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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: AMT

Summary for AMT

Gene informationGene symbol

AMT

Ensembl ID

ENSG00000145020

Entrez ID

275

Gene nameaminomethyltransferase
SynonymsGCST|NKH
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: AMT

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.2821740.00e+00

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Expression of AMT in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to AMT

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating AMT

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
AMThsa-miR-6887-5p95.0012NM_001164711
AMThsa-miR-6795-5p95.0012NM_001164711
AMThsa-miR-3190-3p93.2392NM_001164712
AMThsa-miR-450093.1522NM_000481
AMThsa-let-7e-5p91.097NM_000481
AMThsa-miR-98-5p91.097NM_000481
AMThsa-let-7i-5p91.097NM_000481
AMThsa-let-7c-5p91.097NM_000481
AMThsa-let-7f-5p91.097NM_000481
AMThsa-let-7b-5p91.097NM_000481
AMThsa-let-7g-5p91.097NM_000481
AMThsa-let-7a-5p91.097NM_000481
AMThsa-miR-128990.9831NM_001164712
AMThsa-miR-445889.6986NM_000481
AMThsa-let-7d-5p89.6986NM_000481
AMThsa-miR-6721-5p88.2747NM_000481
AMThsa-miR-477585.6691NM_001164712
AMThsa-miR-6731-5p82.3416NM_001164712
AMThsa-miR-808582.3416NM_001164712
AMThsa-miR-6716-5p80.3725NM_001164712
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Motifs and transcription factors (TFs) regulating AMT

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
AMT"5-methyltetrahydrofolic acid"

DB04789

small molecule
AMT"NADH"

DB00157

small molecule
AMT"Tetrahydrofolic acid"

DB00116

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."