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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ACSL3

Summary for ACSL3

Gene informationGene symbol

ACSL3

Ensembl ID

ENSG00000123983

Entrez ID

2181

Gene nameacyl-CoA synthetase long chain family member 3
SynonymsACS3|FACL3|PRO2194
Gene typeprotein_coding
UniProtAcc

O95573


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Dataset with differentially expressed gene: ACSL3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.4347132.54e-34

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.4115363.97e-22

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.3146181.72e-15

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.6022250.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6540140.00e+00

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Expression of ACSL3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ACSL3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ACSL3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ACSL3hsa-miR-7159-5p99.5257NM_004457
ACSL3hsa-miR-467298.2232NM_004457
ACSL3hsa-miR-153-5p97.7806NM_004457
ACSL3hsa-miR-3065-5p94.2076NM_004457
ACSL3hsa-miR-3140-3p93.4143NM_004457
ACSL3hsa-miR-480393.0899NM_004457
ACSL3hsa-miR-223-3p92.2785NM_004457
ACSL3hsa-miR-568992.0444NM_004457
ACSL3hsa-miR-663a91.7235NM_004457
ACSL3hsa-miR-1908-5p91.7235NM_004457
ACSL3hsa-miR-10396b-5p91.7235NM_004457
ACSL3hsa-miR-42191.5506NM_004457
ACSL3hsa-miR-6787-5p91.1606NM_004457
ACSL3hsa-miR-6876-3p91.1292NM_004457
ACSL3hsa-miR-368590.2822NM_004457
ACSL3hsa-miR-38490.2202NM_004457
ACSL3hsa-miR-62690.2127NM_004457
ACSL3hsa-miR-30090.1264NM_004457
ACSL3hsa-miR-381-3p90.1264NM_004457
ACSL3hsa-miR-548aj-3p89.94NM_004457
ACSL3hsa-miR-548x-3p89.94NM_004457
ACSL3hsa-miR-6833-3p89.1768NM_004457
ACSL3hsa-miR-4666a-3p88.7809NM_004457
ACSL3hsa-miR-524-5p88.3232NM_004457
ACSL3hsa-miR-520d-5p88.3232NM_004457
ACSL3hsa-miR-4680-3p88.2749NM_004457
ACSL3hsa-miR-129788.0373NM_004457
ACSL3hsa-miR-570088.0024NM_004457
ACSL3hsa-miR-105-5p87.8619NM_004457
ACSL3hsa-miR-7853-5p87.8619NM_004457
ACSL3hsa-miR-548aq-3p87.5472NM_004457
ACSL3hsa-miR-548am-3p87.5472NM_004457
ACSL3hsa-miR-548ah-3p87.5472NM_004457
ACSL3hsa-miR-548j-3p87.5472NM_004457
ACSL3hsa-miR-548ae-3p87.5472NM_004457
ACSL3hsa-miR-26a-5p87.3153NM_004457
ACSL3hsa-miR-26b-5p87.3153NM_004457
ACSL3hsa-miR-590-3p86.8675NM_004457
ACSL3hsa-miR-394386.7779NM_004457
ACSL3hsa-miR-446586.6016NM_004457
ACSL3hsa-miR-4724-5p86.3879NM_004457
ACSL3hsa-miR-6871-5p85.5129NM_004457
ACSL3hsa-miR-4768-5p85.1733NM_004457
ACSL3hsa-miR-580-5p85.1183NM_004457
ACSL3hsa-miR-4524a-3p83.4153NM_004457
ACSL3hsa-miR-1185-2-3p83.3941NM_004457
ACSL3hsa-miR-1185-1-3p83.3941NM_004457
ACSL3hsa-let-7f-2-3p83.3941NM_004457
ACSL3hsa-miR-18a-5p83.0657NM_004457
ACSL3hsa-miR-18b-5p83.0657NM_004457
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Motifs and transcription factors (TFs) regulating ACSL3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ACSL3transfac_pro__M06035ZNF749 (directAnnotation).
ACSL3kznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
ACSL3kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
ACSL3transfac_pro__M01253CNOT3 (directAnnotation).
ACSL3transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
ACSL3metacluster_144.3ZNF704; ZNF704 (directAnnotation).
ACSL3transfac_pro__M04916TAF1 (directAnnotation).
ACSL3metacluster_111.5E4F1; E4F1 (directAnnotation).
ACSL3metacluster_135.11NR2C2 (directAnnotation).
ACSL3metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
ACSL3tfdimers__MD00038TFAP2C (directAnnotation).
ACSL3metacluster_7.13ZFX (directAnnotation).
ACSL3kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
ACSL3cisbp__M00968MTF2 (directAnnotation).
ACSL3metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
ACSL3metacluster_160.20JUND; PRDM15 (directAnnotation).
ACSL3cisbp__M00341PAX6 (directAnnotation).
ACSL3metacluster_198.3ZFP64 (directAnnotation).
ACSL3metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
ACSL3metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
ACSL3jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
ACSL3metacluster_61.1DEAF1; DEAF1 (directAnnotation).
ACSL3cisbp__M00788ZFY (inferredBy_Orthology).
ACSL3kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
ACSL3metacluster_175.1ZNF283 (directAnnotation).
ACSL3hdpi__ZNF304ZNF304 (directAnnotation).
ACSL3transfac_pro__M02844BCL6B (inferredBy_Orthology).
ACSL3metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
ACSL3metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
ACSL3transfac_pro__M01199TRIM28 (directAnnotation).
ACSL3kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
ACSL3metacluster_151.2ZNF23 (directAnnotation).
ACSL3transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
ACSL3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ACSL3transfac_pro__M03806ZBTB7C (directAnnotation).
ACSL3transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
ACSL3jaspar__MA0502.2NFYB (directAnnotation).
ACSL3metacluster_144.8ZNF30; ZNF30 (directAnnotation).
ACSL3metacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
ACSL3tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
ACSL3cisbp__M01863ZNF711 (inferredBy_Orthology).
ACSL3taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
ACSL3homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
ACSL3taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
ACSL3taipale_cyt_meth__KLF12_NGCCGACGCCCW_FL_meth_reprKLF12 (directAnnotation).
ACSL3transfac_pro__M05432ZSCAN18 (directAnnotation).
ACSL3transfac_pro__M06104ZNF16 (directAnnotation).
ACSL3metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
ACSL3cisbp__M01725SREBF2 (inferredBy_Orthology).
ACSL3transfac_pro__M06601ZNF501 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."