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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ABR

Summary for ABR

Gene informationGene symbol

ABR

Ensembl ID

ENSG00000276016

Entrez ID

29

Gene nameABR activator of RhoGEF and GTPase
SynonymsMDB
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: ABR

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.431143.96e-04

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.5792450.00e+00

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Expression of ABR in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ABR

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ABR

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ABRhsa-miR-4731-5p99.1392NM_001092
ABRhsa-miR-211394.9135NM_001092
ABRhsa-miR-19b-3p94.586NM_001092
ABRhsa-miR-19a-3p94.586NM_001092
ABRhsa-miR-3667-3p93.8681NM_001092
ABRhsa-miR-5589-5p92.4468NM_001092
ABRhsa-miR-450591.6155NM_001092
ABRhsa-miR-5010-3p91.6051NM_001092
ABRhsa-miR-578791.5478NM_001092
ABRhsa-miR-6830-3p91.3751NM_001092
ABRhsa-miR-6865-5p90.9031NM_001092
ABRhsa-miR-6815-5p90.9031NM_001092
ABRhsa-miR-766-5p90.5118NM_001092
ABRhsa-miR-5195-3p89.7777NM_001092
ABRhsa-miR-145-5p89.7777NM_001092
ABRhsa-miR-428389.74NM_001092
ABRhsa-miR-451489.3485NM_001092
ABRhsa-miR-469287.9716NM_001092
ABRhsa-miR-299-5p87.0012NM_001092
ABRhsa-miR-320e86.0702NM_001092
ABRhsa-miR-34a-5p84.7329NM_001092
ABRhsa-miR-449a84.7329NM_001092
ABRhsa-miR-607984.6167NM_001092
ABRhsa-miR-3059-5p84.353NM_001092
ABRhsa-miR-3613-3p84.1873NM_001092
ABRhsa-miR-449b-5p84.0822NM_001092
ABRhsa-miR-34c-5p84.0822NM_001092
ABRhsa-miR-6868-5p83.2252NM_001092
ABRhsa-miR-452182.8055NM_001092
ABRhsa-miR-485-5p82.4251NM_001092
ABRhsa-miR-6884-5p82.4251NM_001092
ABRhsa-miR-374a-5p81.3167NM_001092
ABRhsa-miR-449280.7216NM_001092
ABRhsa-miR-6510-5p80.6641NM_001092
ABRhsa-miR-504-3p80.2071NM_001092
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Motifs and transcription factors (TFs) regulating ABR

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ABRmetacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
ABRmetacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
ABRtaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
ABRmetacluster_151.2ZNF23 (directAnnotation).
ABRmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
ABRtransfac_pro__M05479ZNF580 (directAnnotation).
ABRkznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
ABRhdpi__ETV4ETV4 (directAnnotation).
ABRhomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
ABRjaspar__MA0079.5SP1 (directAnnotation).
ABRkznf__ZNF594_Schmitges2016_RCADEZNF594 (directAnnotation).
ABRmetacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
ABRtaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
ABRtransfac_pro__M07436WT1 (directAnnotation).
ABRtransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
ABRtaipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
ABRtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ABRmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."