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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: CREM

Summary for CREM

Gene informationGene symbol

CREM

Ensembl ID

ENSG00000095794

Entrez ID

1390

Gene namecAMP responsive element modulator
SynonymshCREM-2
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: CREM

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.4903380.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostNK cells0.3210931.22e-06

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostB cells-0.3651533.89e-05

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.8082180.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells-0.4523840.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro-0.6096991.40e-26

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprePlasma cells0.5886460.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostNK cells0.4665422.14e-02

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells0.6349893.06e-13

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostCD8+ T cells0.2639453.58e-21

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostCD4+ T cells0.3963191.40e-45

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreB cells-0.2879788.42e-12

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD8+ T cells0.3133791.27e-28

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-1.482410.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-1.437930.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD4+ T cells0.5841973.31e-24

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.3443074.63e-03

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells0.5716921.53e-25

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.7493336.14e-21

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreCD8+ T cells-0.4562553.06e-39

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.4109080.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.2866211.96e-42

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.5155160.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells0.5745291.11e-11

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreNK cells0.4624536.61e-08

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.3765791.72e-25

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.428052.51e-19

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.4436381.27e-27

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.3842988.70e-16

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3178632.14e-21

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.2737920.00e+00

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Expression of CREM in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CREM

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CREM

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CREMhsa-miR-60796.3205NM_001881
CREMhsa-miR-670-5p96.012NM_182723
CREMhsa-miR-524-5p95.4123NM_001267570
CREMhsa-miR-520d-5p95.4123NM_001267570
CREMhsa-miR-548x-3p94.7819NM_001267570
CREMhsa-miR-548aj-3p94.7819NM_001267570
CREMhsa-miR-345-3p94.5139NM_182723
CREMhsa-miR-6818-3p93.8072NM_001267570
CREMhsa-miR-548j-3p93.7121NM_001267570
CREMhsa-miR-548am-3p93.7121NM_001267570
CREMhsa-miR-548ah-3p93.7121NM_001267570
CREMhsa-miR-548aq-3p93.7121NM_001267570
CREMhsa-miR-548ae-3p93.7121NM_001267570
CREMhsa-miR-182-3p93.347NM_001267570
CREMhsa-miR-316392.9363NM_001267570
CREMhsa-miR-5003-3p92.3151NM_001881
CREMhsa-miR-6830-3p92.1353NM_182723
CREMhsa-miR-119791.4047NM_001267570
CREMhsa-miR-467890.917NM_001881
CREMhsa-miR-2276-3p90.6577NM_001267570
CREMhsa-miR-488-5p90.594NM_001267570
CREMhsa-miR-548v90.5621NM_001881
CREMhsa-miR-3124-3p90.0426NM_001267570
CREMhsa-miR-6509-5p88.7904NM_001267570
CREMhsa-miR-494-3p86.4663NM_001267570
CREMhsa-miR-330-3p86.2256NM_182723
CREMhsa-miR-132286.1307NM_001881
CREMhsa-miR-331-5p86.1163NM_001881
CREMhsa-miR-4659a-3p85.7883NM_001881
CREMhsa-miR-4659b-3p85.7883NM_001881
CREMhsa-miR-197685.3645NM_182723
CREMhsa-miR-467284.3555NM_001267570
CREMhsa-miR-130a-5p84.3266NM_001267570
CREMhsa-miR-887-5p84.0771NM_182723
CREMhsa-miR-430283.1604NM_001881
CREMhsa-miR-806282.9163NM_001267570
CREMhsa-miR-4753-3p82.3526NM_001881
CREMhsa-miR-367182.0704NM_001881
CREMhsa-miR-544b81.9994NM_001267570
CREMhsa-miR-427781.7563NM_001267570
CREMhsa-miR-203a-3p81.2774NM_001267570
CREMhsa-miR-30c-2-3p81.0987NM_182723
CREMhsa-miR-30c-1-3p81.0987NM_182723
CREMhsa-miR-6788-5p81.0987NM_182723
CREMhsa-miR-61380.6625NM_001267570
CREMhsa-miR-1-3p80.6625NM_001267570
CREMhsa-miR-20680.6625NM_001267570
CREMhsa-miR-120080.6065NM_001267570
CREMhsa-miR-318580.4591NM_001267570
CREMhsa-miR-2681-5p80.08NM_001881
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Motifs and transcription factors (TFs) regulating CREM

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CREMmetacluster_130.3ZNF492; ZNF492 (directAnnotation). OVOL2; OVOL3; PEG3; PLAG1; PLAGL1; PLAGL2; REST; SCAND1; ZKSCAN2; ZNF131; ZNF174; ZNF18; ZNF202; ZNF274; ZNF444; ZNF446; ZNF496; ZNF518A; ZNF518B; ZNF576; ZNF641; ZNF770; ZSCAN1; ZSCAN18; ZSCAN29; ZSCAN32; ZSCAN5A; ZSCAN5B; ZSCAN5C (inferredBy_Orthology).
CREMtransfac_pro__M06072ZNF623 (directAnnotation).
CREMtransfac_pro__M05605GATA6 (inferredBy_Orthology).
CREMmetacluster_62.3HSF5 (directAnnotation).
CREMmetacluster_172.22E4F1 (inferredBy_Orthology).
CREMkznf__ZNF613_Imbeault2017_RP_RCADEZNF613 (directAnnotation).
CREMtfdimers__MD00299ETS1; SRY (directAnnotation).
CREMtransfac_pro__M06647ZNF665 (directAnnotation).
CREMmetacluster_148.1ATF2; ATF2; ATF3; ATF3; ATF3; ATF3; ATF4; ATF4; ATF6; ATF6; ATF6B; ATF7; BATF3; BATF3; CREB1; CREB1; CREB1; CREB3; CREB3; CREB5; CREB5; CREB5; CREM; CREM; FOS; FOS; FOSB; FOSB; FOSB; FOSL1; JDP2; JDP2; JUN; JUN; JUN; JUNB; JUND; MAF; MAF; MAFA; MAFA; MAFF; MAFF; MAFF; MAFF; MAFG; MAFG; ZBTB21 (directAnnotation). ATF1; ATF1; ATF1; ATF1; ATF6; ATF6; ATF6; ATF6; ATF6B; ATF6B; ATF6B; ATF6B; CREB1; CREB1; CREB3; CREB3; CREB3; CREB3; CREB3L1; CREB3L1; CREB3L1; CREB3L1; CREB3L2; CREB3L2; CREB3L2; CREB3L2; CREB3L3; CREB3L3; CREB3L3; CREB3L3; CREB3L4; CREB3L4; CREB3L4; CREB3L4; CREM; CREM; CREM; CREM; JDP2; JUN; JUNB; JUND; MAFB (inferredBy_Orthology).
CREMtransfac_pro__M01864ATF4 (directAnnotation).
CREMmetacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
CREMtransfac_pro__M02089E2F3 (directAnnotation).
CREMtransfac_pro__M07436WT1 (directAnnotation).
CREMhdpi__NRLNRL (directAnnotation).
CREMmetacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
CREMtransfac_pro__M07397ZNF148 (directAnnotation).
CREMtransfac_pro__M04817ZBTB33 (directAnnotation).
CREMtransfac_pro__M04746E2F1 (directAnnotation).
CREMtransfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
CREMmetacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
CREMtransfac_pro__M07329SP7 (directAnnotation).
CREMmetacluster_3.14WT1; WT1 (directAnnotation).
CREMmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
CREMmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
CREMtransfac_pro__M00716ZBTB14 (directAnnotation).
CREMcisbp__M07938E2F1 (directAnnotation).
CREMhomer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
CREMmetacluster_111.6GMEB1; GMEB2 (directAnnotation).
CREMtransfac_pro__M01253CNOT3 (directAnnotation).
CREMdbtfbs__GMEB2_HepG2_ENCSR745VSQ_merged_N1GMEB2 (directAnnotation).
CREMhocomoco__FEV_HUMAN.H11MO.0.BFEV (directAnnotation).
CREMcisbp__M00775ZBTB1 (inferredBy_Orthology).
CREMhdpi__PDLIM5PDLIM5 (directAnnotation).
CREMtransfac_pro__M03846SMAD5 (directAnnotation).
CREMmetacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
CREMtransfac_pro__M01240GTF2IRD1 (directAnnotation).
CREMhdpi__OTUD4OTUD4 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
CREMtransfac_pro__M00801upB cells

GSE169246_PacAteTissue

post
CREMtransfac_pro__M08803upB cells

GSE169246_PacAteTissue

post
CREMmetacluster_111.4downB cells

GSE169246_PacAteTissue

pre
CREMtfdimers__MD00218upNK cells

GSE169246_PacTissue

post
CREMmetacluster_111.3upNK cells

GSE169246_PacTissue

post
CREMmetacluster_111.4downCD8+ T cells

GSE169246_PacTissue

pre
CREMmetacluster_111.3downCD8+ T cells

GSE169246_PacTissue

pre
CREMmetacluster_148.1downCD8+ T cells

GSE169246_PacTissue

pre
CREMtransfac_pro__M00801downCD8+ T cells

GSE189460

pre
CREMmetacluster_111.3downNK cells

GSE199333

post
CREMtransfac_pro__M00801upCD4+ T cells

GSE207422_Sin

post
CREMtransfac_pro__M08803upMono/Macro

GSE207422_Tor

post
CREMmetacluster_111.3downCD4+ T cells

PMID34715028

post
CREMtransfac_pro__M00801downCD4+ T cells

PMID34715028

post
CREMmetacluster_111.4downCD4+ T cells

PMID34715028

post
CREMtransfac_pro__M08803downCD4+ T cells

PMID34715028

post
CREMmetacluster_148.1downCD4+ T cells

PMID34715028

post
CREMmetacluster_111.3downCD8+ T cells

PMID34715028

post
CREMtransfac_pro__M00801downCD8+ T cells

PMID34715028

post
CREMmetacluster_111.4downCD8+ T cells

PMID34715028

post
CREMmetacluster_148.1downCD8+ T cells

PMID34715028

post
CREMtransfac_pro__M08803downCD8+ T cells

PMID34715028

post
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."