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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: REL

Summary for REL

Gene informationGene symbol

REL

Ensembl ID

ENSG00000162924

Entrez ID

5966

Gene nameREL proto-oncogene, NF-kB subunit
Synonymsc-Rel|HIVEN86A|I-Rel
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: REL

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.3340872.38e-44

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.2626451.07e-40

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD8+ T cells-0.2869465.48e-33

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.4769958.07e-35

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.5366962.28e-10

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells0.4714640.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.3352941.06e-08

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD4+ T cells0.3696780.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD8+ T cells0.623110.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro-0.2546114.98e-17

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreNK cells0.4943571.32e-08

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.4168225.43e-10

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-0.6470970.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.7743310.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreCD8+ T cells-0.3328633.19e-22

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostCD8+ T cells-0.2597730.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.7993920.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.6264320.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-1.058610.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.6336690.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.5620820.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreB cells-0.4458252.92e-32

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4130711.97e-21

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Expression of REL in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to REL

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

REL

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating REL

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RELhsa-miR-144-3p97.139NM_001291746
RELhsa-miR-16-1-3p93.0722NM_001291746
RELhsa-miR-4790-3p93.0632NM_001291746
RELhsa-miR-190a-3p90.9727NM_001291746
RELhsa-miR-316388.666NM_001291746
RELhsa-miR-148a-5p87.8326NM_001291746
RELhsa-miR-4796-3p87.7638NM_001291746
RELhsa-miR-574-5p87.582NM_001291746
RELhsa-miR-345-3p87.3385NM_001291746
RELhsa-miR-453486.2788NM_001291746
RELhsa-miR-548c-3p86.1549NM_001291746
RELhsa-miR-3613-3p86.1445NM_001291746
RELhsa-miR-9983-3p85.7218NM_001291746
RELhsa-miR-520e-5p84.7713NM_001291746
RELhsa-miR-670-5p84.643NM_001291746
RELhsa-miR-808284.4759NM_001291746
RELhsa-miR-365983.2189NM_001291746
RELhsa-miR-29c-3p83.1972NM_001291746
RELhsa-miR-29b-3p83.1972NM_001291746
RELhsa-miR-29a-3p83.1972NM_001291746
RELhsa-miR-427282.4892NM_001291746
RELhsa-miR-182581.9222NM_001291746
RELhsa-miR-7159-5p81.8463NM_001291746
RELhsa-miR-6771-3p81.4029NM_001291746
RELhsa-miR-451680.8849NM_001291746
RELhsa-miR-381-3p80.75NM_001291746
RELhsa-miR-30080.75NM_001291746
RELhsa-miR-548at-5p80.6049NM_001291746
RELhsa-miR-374c-3p80.533NM_001291746
RELhsa-miR-6760-5p80.5181NM_001291746
RELhsa-miR-313980.349NM_001291746
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Motifs and transcription factors (TFs) regulating REL

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RELtransfac_pro__M12694ZFP14 (directAnnotation).
RELmetacluster_24.3DIDO1; HINFP; ILF3; ZBTB21; ZFX; ZFX; ZNF283; ZNF37A; ZNF501; ZNF614 (directAnnotation). ZFY; ZFY (inferredBy_Orthology).
RELhdpi__VPS4BVPS4B (directAnnotation).
RELcisbp__M00775ZBTB1 (inferredBy_Orthology).
RELcisbp__M00343PAX6 (directAnnotation).
RELtransfac_pro__M07437ZBTB2 (directAnnotation).
RELmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
RELtransfac_pro__M01118WT1 (directAnnotation).
RELhdpi__OTUD4OTUD4 (directAnnotation).
RELtransfac_pro__M06208ZNF460 (directAnnotation).
RELtransfac_pro__M06545ZNF485 (directAnnotation).
RELtransfac_pro__M05473SALL4 (directAnnotation).
RELtfdimers__MD00085MYB (directAnnotation).
RELtransfac_pro__M01861ATF1 (directAnnotation).
RELcisbp__M04023CREB1 (directAnnotation).
RELmetacluster_111.5E4F1; E4F1 (directAnnotation).
RELmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
RELtransfac_pro__M02092EGR2 (directAnnotation).
RELhocomoco__FEV_HUMAN.H11MO.0.BFEV (directAnnotation).
RELhdpi__PDLIM5PDLIM5 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
RELmetacluster_5.1downB cells

GSE161801_IMiD

pre
RELmetacluster_5.1upCD4+ T cells

GSE169246_PacAteTissue

pre
RELmetacluster_5.1downMono/Macro

GSE169246_PacAteTissue

pre
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."