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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RAD21

Summary for RAD21

Gene informationGene symbol

RAD21

Ensembl ID

ENSG00000164754

Entrez ID

5885

Gene nameRAD21 cohesin complex component
SynonymshHR21|KIAA0078|SCC1
Gene typeprotein_coding
UniProtAcc

O60216


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Dataset with differentially expressed gene: RAD21

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.4374476.07e-32

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells0.4124030.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.2899940.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.3142290.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.306380.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.3547132.84e-14

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.4349295.50e-19

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.3467110.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.5105650.00e+00

GSE158457

PDX cellsCell lineAcute lymphoblastic leukemiaT-cell acute lymphoblastic leukemia (ALL)Targeted therapydasatinibNAMalignant cells-0.2836240.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.3303550.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.3079447.07e-34

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.3289261.90e-42

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.2729990.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.7514880.00e+00

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Expression of RAD21 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RAD21

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RAD21

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RAD21hsa-miR-314897.2173NM_006265
RAD21hsa-miR-18b-3p96.0664NM_006265
RAD21hsa-miR-3157-3p95.8607NM_006265
RAD21hsa-miR-130595.6903NM_006265
RAD21hsa-miR-7151-3p95.5674NM_006265
RAD21hsa-miR-548at-5p95.527NM_006265
RAD21hsa-miR-3944-5p95.4856NM_006265
RAD21hsa-miR-6715b-5p95.054NM_006265
RAD21hsa-miR-426995.054NM_006265
RAD21hsa-let-7f-1-3p93.9709NM_006265
RAD21hsa-let-7b-3p93.9709NM_006265
RAD21hsa-let-7a-3p93.9709NM_006265
RAD21hsa-miR-98-3p93.9709NM_006265
RAD21hsa-miR-477593.4356NM_006265
RAD21hsa-miR-471993.3988NM_006265
RAD21hsa-miR-5582-3p91.8386NM_006265
RAD21hsa-miR-427591.592NM_006265
RAD21hsa-miR-4704-5p91.5124NM_006265
RAD21hsa-let-7a-2-3p91.4795NM_006265
RAD21hsa-let-7g-3p91.4795NM_006265
RAD21hsa-miR-23a-3p91.0117NM_006265
RAD21hsa-miR-23b-3p91.0117NM_006265
RAD21hsa-miR-23c91.0117NM_006265
RAD21hsa-miR-1213690.287NM_006265
RAD21hsa-miR-4661-5p90.1505NM_006265
RAD21hsa-miR-888-5p89.59NM_006265
RAD21hsa-miR-32-5p89.2898NM_006265
RAD21hsa-miR-92b-3p89.2898NM_006265
RAD21hsa-miR-92a-3p89.2898NM_006265
RAD21hsa-miR-548c-3p88.7759NM_006265
RAD21hsa-miR-4789-5p88.771NM_006265
RAD21hsa-miR-5006-3p88.6801NM_006265
RAD21hsa-miR-4755-5p88.6801NM_006265
RAD21hsa-miR-590-3p88.271NM_006265
RAD21hsa-miR-875-3p87.1514NM_006265
RAD21hsa-miR-126486.7195NM_006265
RAD21hsa-miR-124386.691NM_006265
RAD21hsa-miR-4738-3p85.9807NM_006265
RAD21hsa-miR-7107-3p85.875NM_006265
RAD21hsa-miR-6753-3p85.875NM_006265
RAD21hsa-miR-127985.5764NM_006265
RAD21hsa-miR-360985.3891NM_006265
RAD21hsa-miR-548ah-5p85.3891NM_006265
RAD21hsa-miR-25-3p85.3748NM_006265
RAD21hsa-miR-367-3p85.3748NM_006265
RAD21hsa-miR-363-3p85.3748NM_006265
RAD21hsa-miR-433-3p85.1827NM_006265
RAD21hsa-miR-6831-3p85.0454NM_006265
RAD21hsa-miR-15b-3p84.6838NM_006265
RAD21hsa-miR-493-5p84.585NM_006265
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Motifs and transcription factors (TFs) regulating RAD21

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RAD21cisbp__M00808MYPOP (inferredBy_Orthology).
RAD21transfac_pro__M05529ZBTB5 (inferredBy_Orthology).
RAD21transfac_pro__M06432ZNF571 (directAnnotation).
RAD21hdpi__MLXMLX (directAnnotation).
RAD21taipale_tf_pairs__FOXJ3_ELF1_NNARAAAACCGAAWMN_CAPELF1; FOXJ3 (directAnnotation).
RAD21transfac_pro__M06415ZNF429 (directAnnotation).
RAD21taipale_tf_pairs__MYBL1_EOMES_NNSYGNCNAACNNNNNNCACRCNN_CAP_reprEOMES; MYBL1 (directAnnotation).
RAD21hocomoco__E2F8_HUMAN.H11MO.0.DE2F8 (directAnnotation).
RAD21transfac_pro__M05731ZNF660 (directAnnotation).
RAD21kznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
RAD21transfac_pro__M06035ZNF749 (directAnnotation).
RAD21cisbp__M07938E2F1 (directAnnotation).
RAD21kznf__ZNF141_Imbeault2017_RP_RCADEZNF141 (directAnnotation).
RAD21metacluster_72.9SALL2 (directAnnotation). SALL2 (inferredBy_Orthology).
RAD21transfac_pro__M02090E2F4 (directAnnotation).
RAD21transfac_pro__M06229ZNF91 (directAnnotation).
RAD21dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
RAD21kznf__ZNF846_Imbeault2017_RP_ChIP-seqZNF846 (directAnnotation).
RAD21metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
RAD21metacluster_163.2ZNF682 (directAnnotation).
RAD21taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
RAD21kznf__ZNF548_Imbeault2017_OM_RCADEZNF548 (directAnnotation).
RAD21kznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
RAD21transfac_pro__M06463ZNF595 (directAnnotation).
RAD21kznf__ZNF2_Imbeault2017_RP_ChIP-seqZNF2 (directAnnotation).
RAD21metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
RAD21jaspar__MA0597.2THAP1 (directAnnotation).
RAD21jaspar__MA1596.1ZNF460 (directAnnotation).
RAD21taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
RAD21transfac_pro__M04817ZBTB33 (directAnnotation).
RAD21hdpi__NRLNRL (directAnnotation).
RAD21flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
RAD21hdpi__FEZF2FEZF2 (directAnnotation).
RAD21metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
RAD21metacluster_61.1DEAF1; DEAF1 (directAnnotation).
RAD21metacluster_155.11SPZ1 (directAnnotation).
RAD21hdpi__HTATIP2HTATIP2 (directAnnotation).
RAD21transfac_pro__M01240GTF2IRD1 (directAnnotation).
RAD21idmmpmm__MadSMAD9 (inferredBy_Orthology).
RAD21transfac_pro__M02933ZBTB14 (inferredBy_Orthology).
RAD21tfdimers__MD00483ZBTB14 (directAnnotation).
RAD21transfac_pro__M07317CTBP1 (directAnnotation).
RAD21transfac_pro__M03806ZBTB7C (directAnnotation).
RAD21jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
RAD21transfac_pro__M01783SP2 (directAnnotation).
RAD21transfac_pro__M04916TAF1 (directAnnotation).
RAD21hdpi__RARARARA (directAnnotation).
RAD21jaspar__MA1650.1ZBTB14 (directAnnotation).
RAD21cisbp__M08228PAX5 (directAnnotation).
RAD21transfac_pro__M01088DEAF1 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."