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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: HP1BP3

Summary for HP1BP3

Gene informationGene symbol

HP1BP3

Ensembl ID

ENSG00000127483

Entrez ID

50809

Gene nameheterochromatin protein 1 binding protein 3
SynonymsHP1-BP74
Gene typeprotein_coding
UniProtAcc

Q5SSJ5


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Dataset with differentially expressed gene: HP1BP3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-0.6169096.86e-03

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.5759790.00e+00

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells0.2866338.06e-30

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.2830670.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.255220.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.2570837.21e-34

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.4497130.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.2767630.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostB cells0.8297841.97e-02

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.2685330.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4428460.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.2568660.00e+00

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Expression of HP1BP3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to HP1BP3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating HP1BP3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
HP1BP3hsa-miR-323a-3p99.3271NM_016287
HP1BP3hsa-miR-4640-5p97.0924NM_016287
HP1BP3hsa-miR-185-5p96.7581NM_016287
HP1BP3hsa-miR-464496.7581NM_016287
HP1BP3hsa-miR-4726-5p96.7424NM_016287
HP1BP3hsa-miR-430696.706NM_016287
HP1BP3hsa-miR-471995.6482NM_016287
HP1BP3hsa-miR-1212393.8666NM_016287
HP1BP3hsa-miR-797793.7474NM_016287
HP1BP3hsa-miR-373-5p93.6762NM_016287
HP1BP3hsa-miR-371b-5p93.6762NM_016287
HP1BP3hsa-miR-616-5p93.6762NM_016287
HP1BP3hsa-miR-366293.0445NM_016287
HP1BP3hsa-miR-1-3p91.9433NM_016287
HP1BP3hsa-miR-3529-3p91.7793NM_016287
HP1BP3hsa-miR-57791.6503NM_016287
HP1BP3hsa-miR-61391.6087NM_016287
HP1BP3hsa-miR-6840-3p91.605NM_016287
HP1BP3hsa-miR-7-2-3p91.5102NM_016287
HP1BP3hsa-miR-7-1-3p91.5102NM_016287
HP1BP3hsa-miR-128391.1653NM_016287
HP1BP3hsa-miR-20691.0383NM_016287
HP1BP3hsa-miR-311990.7913NM_016287
HP1BP3hsa-miR-499a-5p90.2573NM_016287
HP1BP3hsa-miR-3617-5p89.4062NM_016287
HP1BP3hsa-miR-64189.4062NM_016287
HP1BP3hsa-miR-208b-3p89.0043NM_016287
HP1BP3hsa-miR-208a-3p89.0043NM_016287
HP1BP3hsa-miR-548an88.7489NM_016287
HP1BP3hsa-miR-144-5p88.3564NM_016287
HP1BP3hsa-miR-63688.231NM_016287
HP1BP3hsa-miR-593-5p87.9497NM_016287
HP1BP3hsa-miR-9851-3p87.9497NM_016287
HP1BP3hsa-miR-493-5p87.9494NM_016287
HP1BP3hsa-miR-428287.3222NM_016287
HP1BP3hsa-miR-6825-5p86.8162NM_016287
HP1BP3hsa-miR-1211785.6301NM_016287
HP1BP3hsa-miR-1277-5p85.6267NM_016287
HP1BP3hsa-miR-806385.5038NM_016287
HP1BP3hsa-miR-218-5p85.489NM_016287
HP1BP3hsa-miR-6715b-5p84.2779NM_016287
HP1BP3hsa-miR-6868-5p83.6931NM_016287
HP1BP3hsa-miR-3127-3p83.606NM_016287
HP1BP3hsa-miR-6756-3p83.606NM_016287
HP1BP3hsa-miR-3613-3p82.6005NM_016287
HP1BP3hsa-miR-453181.3688NM_016287
HP1BP3hsa-miR-7106-5p80.7354NM_016287
HP1BP3hsa-miR-302b-3p80.3659NM_016287
HP1BP3hsa-miR-520e-3p80.3659NM_016287
HP1BP3hsa-miR-520b-3p80.3659NM_016287
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Motifs and transcription factors (TFs) regulating HP1BP3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
HP1BP3dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
HP1BP3cisbp__M08228PAX5 (directAnnotation).
HP1BP3transfac_pro__M01088DEAF1 (inferredBy_Orthology).
HP1BP3transfac_pro__M00938E2F1 (directAnnotation).
HP1BP3kznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
HP1BP3transfac_pro__M00800TFAP2A; TFAP2B; TFAP2C (directAnnotation).
HP1BP3kznf__ZNF267_Imbeault2017_RP_RCADEZNF267 (directAnnotation).
HP1BP3cisbp__M00788ZFY (inferredBy_Orthology).
HP1BP3metacluster_24.3DIDO1; HINFP; ILF3; ZBTB21; ZFX; ZFX; ZNF283; ZNF37A; ZNF501; ZNF614 (directAnnotation). ZFY; ZFY (inferredBy_Orthology).
HP1BP3metacluster_126.7CTCF; ZFY; ZSCAN30 (directAnnotation).
HP1BP3transfac_pro__M03846SMAD5 (directAnnotation).
HP1BP3metacluster_45.4E2F2 (directAnnotation).
HP1BP3taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
HP1BP3metacluster_175.1ZNF283 (directAnnotation).
HP1BP3metacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
HP1BP3cisbp__M00343PAX6 (directAnnotation).
HP1BP3taipale_tf_pairs__ETV5_HES7_CCGGAANNNNNNCACGTG_CAPETV5; HES7 (directAnnotation).
HP1BP3taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
HP1BP3metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
HP1BP3transfac_pro__M01199TRIM28 (directAnnotation).
HP1BP3transfac_pro__M12694ZFP14 (directAnnotation).
HP1BP3metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
HP1BP3metacluster_115.1NEUROD1; PHF1; ZBTB20; ZNF17; ZNF296; ZNF350; ZNF486; ZNF574; ZNF589; ZNF891 (directAnnotation). IRF4; IRF6; PRDM5 (inferredBy_Orthology).
HP1BP3kznf__ZNF267_Imbeault2017_OM_RCADEZNF267 (directAnnotation).
HP1BP3transfac_pro__M07387ZBTB7A (directAnnotation).
HP1BP3kznf__ZNF2_Imbeault2017_RP_ChIP-seqZNF2 (directAnnotation).
HP1BP3cisbp__M00775ZBTB1 (inferredBy_Orthology).
HP1BP3transfac_pro__M09837ZNF449 (directAnnotation).
HP1BP3transfac_pro__M00430E2F1 (directAnnotation).
HP1BP3kznf__ZNF311_Imbeault2017_RP_ChIP-seqZNF311 (directAnnotation).
HP1BP3tfdimers__MD00364WT1 (directAnnotation).
HP1BP3hdpi__GTF3C2GTF3C2 (directAnnotation).
HP1BP3metacluster_198.3ZFP64 (directAnnotation).
HP1BP3jaspar__MA1721.1ZNF93 (directAnnotation).
HP1BP3transfac_pro__M08005TCFL5 (inferredBy_Orthology).
HP1BP3kznf__ZNF548_Imbeault2017_OM_RCADEZNF548 (directAnnotation).
HP1BP3metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
HP1BP3kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
HP1BP3transfac_pro__M04646FOXN4 (directAnnotation).
HP1BP3metacluster_126.2ZBTB4; ZBTB4 (directAnnotation).
HP1BP3kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
HP1BP3kznf__ZNF2_Imbeault2017_OM_RCADEZNF2 (directAnnotation).
HP1BP3kznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
HP1BP3taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
HP1BP3transfac_pro__M04617ZBTB7A (directAnnotation).
HP1BP3transfac_pro__M01858TFAP2B (directAnnotation).
HP1BP3metacluster_66.4ARNT2; NR0B1; NR0B1; ZSCAN5A; ZSCAN5A (directAnnotation). ARNT2 (inferredBy_Orthology).
HP1BP3metacluster_35.2EGR1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF3; ELF4; ELF4; ELK1; ELK3; ELK4; ERG; ETS1; ETS1; ETS2; ETV1; ETV1; ETV5; ETV5; ETV6; FLI1; FLI1; GABPA; GABPA; GABPA; GABPB1; GABPB1; GABPB1; ZBTB7A (directAnnotation). ELF2; ELF2; ERG; ERG; ETS2; FLI1; GABPA; IKZF3; SPIC (inferredBy_Orthology).
HP1BP3metacluster_135.11NR2C2 (directAnnotation).
HP1BP3transfac_pro__M07437ZBTB2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
HP1BP3"Artenimol"

DB11638

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."