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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: DUSP4

Summary for DUSP4

Gene informationGene symbol

DUSP4

Ensembl ID

ENSG00000120875

Entrez ID

1846

Gene namedual specificity phosphatase 4
SynonymsHVH2|MKP-2|TYP
Gene typeprotein_coding
UniProtAcc

Q13115


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Dataset with differentially expressed gene: DUSP4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostNK cells0.8156130.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD8+ T cells0.4318713.08e-44

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.277963.16e-04

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.7694440.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostCD4+ T cells0.6153150.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostNK cells0.7074473.43e-04

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD4+ T cells0.6714790.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD8+ T cells-0.2820671.25e-27

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD4+ T cells-0.4162561.31e-08

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-1.39610.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-1.514670.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells1.245340.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD4+ T cells0.9577831.52e-37

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.6263450.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.7062220.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells0.3958552.14e-23

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.6445190.00e+00

GSE104987

MCF7 cell lineCell lineBreast cancerER+ breast cancerTargeted therapyKDM5-C70NAMalignant cells-0.5378611.32e-34

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.5554650.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMalignant cells-0.8904350.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells0.5172840.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.794160.00e+00

GSE164897_Vem

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenibNAMalignant cells0.5697080.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.7637480.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.5501140.00e+00

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Expression of DUSP4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to DUSP4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating DUSP4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
DUSP4hsa-miR-4728-5p98.5567NM_057158
DUSP4hsa-miR-6785-5p98.4676NM_057158
DUSP4hsa-miR-149-3p96.936NM_057158
DUSP4hsa-miR-6883-5p96.936NM_057158
DUSP4hsa-miR-6876-3p94.4658NM_057158
DUSP4hsa-miR-62693.6216NM_057158
DUSP4hsa-miR-491-3p93.2611NM_057158
DUSP4hsa-miR-480190.8124NM_057158
DUSP4hsa-miR-6857-3p90.8088NM_001394
DUSP4hsa-miR-137-3p89.2505NM_001394
DUSP4hsa-miR-4668-5p88.5902NM_001394
DUSP4hsa-miR-498-5p88.282NM_001394
DUSP4hsa-miR-4731-3p88.161NM_057158
DUSP4hsa-miR-6830-5p88.0086NM_057158
DUSP4hsa-miR-1249-5p87.9367NM_001394
DUSP4hsa-miR-3663-3p86.7024NM_001394
DUSP4hsa-miR-453385.3836NM_001394
DUSP4hsa-miR-6797-5p84.8541NM_001394
DUSP4hsa-miR-366884.6207NM_001394
DUSP4hsa-miR-3942-5p84.4396NM_001394
DUSP4hsa-miR-4703-5p84.4396NM_001394
DUSP4hsa-miR-4714-5p82.4973NM_057158
DUSP4hsa-miR-3913-3p81.571NM_057158
DUSP4hsa-miR-806581.1361NM_057158
DUSP4hsa-miR-6818-3p80.1112NM_057158
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Motifs and transcription factors (TFs) regulating DUSP4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
DUSP4taipale__POU6F2_DBD_WTAATKAGCTMATTAWPOU6F2 (directAnnotation).
DUSP4transfac_pro__M06353ZNF782 (directAnnotation).
DUSP4transfac_pro__M02015FOXA3 (directAnnotation).
DUSP4transfac_pro__M05794ZNF621 (directAnnotation).
DUSP4transfac_pro__M06834PEG3 (directAnnotation).
DUSP4hocomoco__FOXP3_HUMAN.H11MO.0.DFOXP3 (directAnnotation).
DUSP4transfac_pro__M05347NR2C1 (directAnnotation).
DUSP4transfac_pro__M00742FOXJ1 (directAnnotation).
DUSP4metacluster_179.4MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2A; MEF2B; MEF2B; MEF2B; MEF2B; MEF2C; MEF2C; MEF2C; MEF2C; MEF2C; MEF2C; MEF2C; MEF2C; MEF2C; MEF2C; MEF2D; MEF2D; MEF2D; MEF2D; MEF2D; MEF2D (directAnnotation). MEF2A; MEF2A; MEF2C; MEF2D; MEF2D; MYEF2 (inferredBy_Orthology).
DUSP4metacluster_4.3SMAD1; SOX10; SOX15; SOX18; SOX2; SOX2; SOX2; SOX3; SOX3; SOX4; SOX4; SOX4; SOX4; SOX6; SOX9; SOX9 (directAnnotation). NANOG; NANOGP8; SOX10; SOX11; SOX11; SOX17; SOX4; SOX6; SOX6; SOX9 (inferredBy_Orthology).
DUSP4taipale_tf_pairs__CUX1_TBX21_TMACACCYAATA_CAP_reprCUX1; TBX21 (directAnnotation).
DUSP4tfdimers__MD00318HNF4A; HNF4G; NR2F1; NR2F2; PAX4 (directAnnotation).
DUSP4tfdimers__MD00411ELF5; YY1 (directAnnotation).
DUSP4metacluster_130.2ZNF182; ZNF22; ZNF225; ZNF225; ZNF285; ZNF362; ZNF362; ZNF384; ZNF487; ZNF512; ZNF570; ZNF613 (directAnnotation). ZNF384 (inferredBy_Orthology).
DUSP4transfac_pro__M04886ETS1 (directAnnotation).
DUSP4transfac_pro__M05682ZNF25 (directAnnotation).
DUSP4transfac_public__M00209NFYA; NFYB; NFYC (directAnnotation).
DUSP4transfac_pro__M05427ZNF516 (directAnnotation).
DUSP4metacluster_79.16PRDM15; PRDM15 (inferredBy_Orthology).
DUSP4kznf__ZSCAN29_TF_Evolution_PBMZSCAN29 (directAnnotation).
DUSP4transfac_pro__M06305ZNF583 (inferredBy_Orthology).
DUSP4transfac_pro__M05731ZNF660 (directAnnotation).
DUSP4taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_reprZNF385D (directAnnotation).
DUSP4transfac_pro__M01886NFATC3 (directAnnotation).
DUSP4transfac_pro__M01861ATF1 (directAnnotation).
DUSP4transfac_pro__M07448ZBED1 (directAnnotation).
DUSP4metacluster_111.5E4F1; E4F1 (directAnnotation).
DUSP4transfac_pro__M06776ZNF214 (directAnnotation).
DUSP4kznf__CTCF_Transfac.7_TransfacCTCF (directAnnotation).
DUSP4tfdimers__MD00071CEBPA; CEBPB; CEBPD; CEBPE; CEBPG; SOX10 (directAnnotation).
DUSP4tfdimers__MD00465CRX; IKZF1 (directAnnotation).
DUSP4metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
DUSP4taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
DUSP4cisbp__M00249WT1 (directAnnotation).
DUSP4cisbp__M00809PRDM11 (inferredBy_Orthology).
DUSP4hdpi__NRLNRL (directAnnotation).
DUSP4transfac_pro__M02898SMAD3 (directAnnotation).
DUSP4transfac_pro__M01122ZNF219 (directAnnotation).
DUSP4dbtfbs__HIC1_HEK293_ENCSR803GYT_merged_N1HIC1 (directAnnotation).
DUSP4metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
DUSP4kznf__ZBTB12_Schmitges2016_RCADEZBTB12 (directAnnotation).
DUSP4transfac_pro__M06383ZNF629 (inferredBy_Orthology).
DUSP4transfac_pro__M00801ATF1; ATF2; ATF3; ATF4; ATF7; CREB1; CREM (directAnnotation). ATF7-NPFF (inferredBy_Orthology).
DUSP4transfac_public__M00040ATF2 (directAnnotation).
DUSP4metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
DUSP4transfac_pro__M07436WT1 (directAnnotation).
DUSP4metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
DUSP4transfac_pro__M07329SP7 (directAnnotation).
DUSP4flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
DUSP4metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."