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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: SP3

Summary for SP3

Gene informationGene symbol

SP3

Ensembl ID

ENSG00000172845

Entrez ID

6670

Gene nameSp3 transcription factor
SynonymsSPR-2
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: SP3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.4594428.04e-43

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.2858670.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.2990831.12e-44

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.318490.00e+00

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Expression of SP3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SP3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SP3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SP3hsa-miR-493-5p99.9387NM_001017371
SP3hsa-miR-806399.3786NM_001017371
SP3hsa-miR-6733-3p99.2623NM_001172712
SP3hsa-miR-223-3p99.0186NM_001172712
SP3hsa-miR-428298.9365NM_001017371
SP3hsa-miR-469898.9175NM_001017371
SP3hsa-miR-154-3p98.7357NM_001017371
SP3hsa-miR-487a-3p98.7357NM_001017371
SP3hsa-miR-4716-5p98.6346NM_001172712
SP3hsa-miR-200b-5p98.5343NM_001172712
SP3hsa-miR-200a-5p98.5343NM_001172712
SP3hsa-miR-130598.1813NM_001017371
SP3hsa-let-7c-3p97.9674NM_001017371
SP3hsa-let-7a-2-3p97.9674NM_001017371
SP3hsa-let-7g-3p97.9674NM_001017371
SP3hsa-miR-4753-3p97.8845NM_001172712
SP3hsa-miR-524-5p97.7346NM_001017371
SP3hsa-miR-4659a-3p97.7131NM_001017371
SP3hsa-miR-4659b-3p97.7131NM_001017371
SP3hsa-miR-497-3p97.5486NM_001017371
SP3hsa-miR-451197.4997NM_001172712
SP3hsa-miR-338-5p97.1143NM_001017371
SP3hsa-miR-520d-5p96.92NM_001017371
SP3hsa-miR-548c-3p96.9104NM_001017371
SP3hsa-miR-2681-5p96.8143NM_001017371
SP3hsa-miR-548ar-3p96.7758NM_001172712
SP3hsa-miR-7856-5p96.6171NM_001172712
SP3hsa-miR-4676-3p96.3896NM_001172712
SP3hsa-miR-452-5p96.3896NM_001172712
SP3hsa-miR-892c-3p96.3896NM_001172712
SP3hsa-miR-548az-3p96.3378NM_001172712
SP3hsa-miR-548bc95.7944NM_001172712
SP3hsa-miR-548a-3p95.7944NM_001172712
SP3hsa-miR-548f-3p95.7944NM_001172712
SP3hsa-miR-548e-3p95.7944NM_001172712
SP3hsa-miR-1213694.7485NM_001017371
SP3hsa-miR-60794.6618NM_001017371
SP3hsa-miR-488-3p94.6215NM_001017371
SP3hsa-miR-3680-3p94.404NM_001017371
SP3hsa-miR-7159-3p94.2059NM_001172712
SP3hsa-miR-6809-3p94.0525NM_001172712
SP3hsa-miR-182-5p93.96NM_001017371
SP3hsa-miR-6792-3p93.944NM_001017371
SP3hsa-miR-50793.4394NM_001172712
SP3hsa-miR-153-5p93.3277NM_001172712
SP3hsa-miR-548t-3p92.9933NM_001172712
SP3hsa-miR-548ap-3p92.9933NM_001172712
SP3hsa-miR-548aa92.9933NM_001172712
SP3hsa-miR-410-3p92.8543NM_001017371
SP3hsa-miR-4697-3p92.6845NM_001172712
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Motifs and transcription factors (TFs) regulating SP3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SP3kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SP3taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
SP3metacluster_126.4ZNF12; ZNF12; ZNF44; ZNF563; ZNF93 (directAnnotation).
SP3metacluster_182.10ZFX (directAnnotation).
SP3metacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
SP3jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
SP3metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
SP3hdpi__TIMELESSTIMELESS (directAnnotation).
SP3metacluster_191.5SPDEF (inferredBy_Orthology).
SP3hdpi__TP73TP73 (directAnnotation).
SP3metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
SP3hdpi__ELF2ELF2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
SP3metacluster_3.11upMalignant cells

GSE138267

NA
SP3metacluster_3.7upMalignant cells

GSE138267

NA
SP3metacluster_3.4upMalignant cells

GSE138267

NA
SP3transfac_pro__M00665downMalignant cells

GSE199333

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."