DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target

Gene: SOD2

Summary for SOD2

Gene informationGene symbol

SOD2

Ensembl ID

ENSG00000291237

Entrez ID

6648

Gene namesuperoxide dismutase 2
SynonymsGC1|GClnc1|IPOB|MnSOD
Gene typeprotein_coding
UniProtAcc

P04179


Top

Dataset with differentially expressed gene: SOD2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.5607211.42e-40

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.9388320.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.4808321.19e-08

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.4042036.55e-08

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro0.3089251.32e-04

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro-0.468542.78e-21

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.2614395.60e-19

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro1.217942.04e-19

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils0.9094159.84e-42

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMono/Macro0.5433784.48e-23

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-1.120690.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostMalignant cells-0.3011520.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpreMalignant cells-0.4977710.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.5651440.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-1.10870.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.8240890.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-1.163580.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells1.1040.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.2746630.00e+00

Top

Expression of SOD2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to SOD2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

SOD2

Drug Inactivation by Structure Modification

SOD2

Unusual Activation of Pro-survival Pathway
Page: 1

Top

MicroRNAs (miRNA) regulating SOD2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SOD2hsa-miR-806997.0521NM_001322815
SOD2hsa-miR-4482-3p96.8796NM_001322815
SOD2hsa-miR-377-3p96.1041NM_001322815
SOD2hsa-miR-642a-3p95.1432NM_001322815
SOD2hsa-miR-642b-3p95.1432NM_001322815
SOD2hsa-miR-212-3p94.7681NM_001322815
SOD2hsa-miR-132-3p94.7681NM_001322815
SOD2hsa-miR-589-3p91.0489NM_001322815
SOD2hsa-miR-9851-5p90.7663NM_001322816
SOD2hsa-miR-7159-3p90.3665NM_001322815
SOD2hsa-miR-128389.6164NM_000636
SOD2hsa-miR-382-5p88.9017NM_001322815
SOD2hsa-miR-519388.5403NM_001322816
SOD2hsa-miR-4477b88.003NM_001322816
SOD2hsa-miR-470587.2984NM_001322815
SOD2hsa-miR-1213085.9317NM_001322816
SOD2hsa-miR-653-5p85.6808NM_001322816
SOD2hsa-miR-380-5p85.6442NM_001024466
SOD2hsa-miR-314885.6329NM_000636
SOD2hsa-miR-7160-5p84.8598NM_001322815
SOD2hsa-miR-223-3p84.4578NM_001322816
SOD2hsa-miR-3613-3p83.487NM_001322815
SOD2hsa-miR-892c-5p83.1995NM_001322815
SOD2hsa-miR-125a-5p82.9946NM_001322816
SOD2hsa-miR-125b-5p82.9946NM_001322816
SOD2hsa-miR-431982.9946NM_001322816
SOD2hsa-miR-80282.79NM_001322815
SOD2hsa-miR-338-5p82.7884NM_001322816
SOD2hsa-miR-316982.4649NM_001322816
SOD2hsa-miR-659-5p82.3163NM_001024466
SOD2hsa-miR-106a-3p82.1022NM_001322815
SOD2hsa-miR-519d-5p80.9773NM_001322815
SOD2hsa-miR-127680.9155NM_001322815
SOD2hsa-miR-450b-5p80.7004NM_001322816
SOD2hsa-miR-30a-3p80.2552NM_001024466
SOD2hsa-miR-30d-3p80.2552NM_001024466
SOD2hsa-miR-30e-3p80.2552NM_001024466
Page: 1

Top

Motifs and transcription factors (TFs) regulating SOD2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SOD2jaspar__MA1125.1ZNF384 (directAnnotation).
SOD2transfac_pro__M01239RELA (directAnnotation).
SOD2kznf__ZNF384_Schmitges2016_RCADEZNF384 (directAnnotation).
SOD2metacluster_22.21NFE2L2 (inferredBy_Orthology).
SOD2transfac_pro__M05762ZNF774 (directAnnotation).
SOD2metacluster_46.4CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; DBP; DBP; EP300; GATAD2A; HES2 (directAnnotation). CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPE; CEBPE; CEBPE; CEBPG; CEBPG; HLF; HLF (inferredBy_Orthology).
SOD2metacluster_22.18BACH2 (inferredBy_Orthology).
SOD2transfac_pro__M06388ZNF677 (directAnnotation).
SOD2transfac_pro__M05831ZNF880 (directAnnotation).
SOD2metacluster_22.11NFE2 (directAnnotation).
SOD2taipale_tf_pairs__GCM1_CEBPB_MTRSGGGNNNNNNTTRCGYAAN_CAPCEBPB; GCM1 (directAnnotation).
SOD2cisbp__M04023CREB1 (directAnnotation).
SOD2tfdimers__MD00031MYB; ZEB1 (directAnnotation).
SOD2transfac_pro__M05464SALL1 (directAnnotation).
SOD2metacluster_167.7IRF8 (inferredBy_Orthology).
SOD2cisbp__M02748NFATC1 (directAnnotation).
SOD2yetfasco__TBP-TFIIA-TFIIB_1330GTF2B; TBPL2 (inferredBy_Orthology).
SOD2tfdimers__MD00409ETS1; YY2 (directAnnotation).
SOD2transfac_pro__M06807SALL2 (inferredBy_Orthology).
SOD2metacluster_22.13MAFK (inferredBy_Orthology).
SOD2kznf__ZNF584_Imbeault2017_OM_RCADEZNF584 (directAnnotation).
SOD2metacluster_22.29NFE2 (directAnnotation).
SOD2homer__ATTGCGCAAC_CEBPCEBPB (inferredBy_Orthology).
SOD2metacluster_22.17NFE2 (directAnnotation).
SOD2tfdimers__MD00095ELF1; NEUROD1 (directAnnotation).
SOD2metacluster_22.25NFE2L2 (directAnnotation).
SOD2transfac_pro__M06072ZNF623 (directAnnotation).
SOD2transfac_pro__M08190AR (directAnnotation).
SOD2kznf__ZNF77_Imbeault2017_OM_MEMEZNF77 (directAnnotation).
SOD2kznf__CTCF_Rhee2011.3_ChIP-exoCTCF (directAnnotation).
SOD2tfdimers__MD00143IKZF1; MZF1 (directAnnotation).
SOD2taipale_tf_pairs__ELK1_FOXI1_RSCGGAANNRTMAAYA_CAP_reprELK1; FOXI1 (directAnnotation).
SOD2kznf__ZNF124_Imbeault2017_RP_RCADEZNF124 (directAnnotation).
SOD2taipale_tf_pairs__ETV2_GSC2_RCCGGANNNNNNNNNTAATCCN_CAP_reprETV2; GSC2 (directAnnotation).
SOD2metacluster_171.1HSFY1; HSFY2; TEAD1; TEAD1; TEAD3 (directAnnotation).
SOD2transfac_pro__M00801ATF1; ATF2; ATF3; ATF4; ATF7; CREB1; CREM (directAnnotation). ATF7-NPFF (inferredBy_Orthology).
SOD2transfac_public__M00039CREB1 (directAnnotation).
SOD2metacluster_111.5E4F1; E4F1 (directAnnotation).
SOD2transfac_pro__M04746E2F1 (directAnnotation).
SOD2transfac_pro__M00716ZBTB14 (directAnnotation).
Page: 1 2 3

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
SOD2"3-Fluoro-L-tyrosine"

DB04436

small molecule
SOD2"Benzylsulfonic acid"

DB03297

small molecule
Page: 1




1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."