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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SNX10

Summary for SNX10

Gene informationGene symbol

SNX10

Ensembl ID

ENSG00000086300

Entrez ID

29887

Gene namesorting nexin 10
SynonymsNA
Gene typeprotein_coding
UniProtAcc

Q9Y5X0


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Dataset with differentially expressed gene: SNX10

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.8817528.98e-07

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostMono/Macro0.2614142.38e-14

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.5919040.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro0.4230334.69e-04

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro-0.5816592.93e-07

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMono/Macro-0.2500821.58e-32

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.4298770.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.271490.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.5342485.55e-29

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.583570.00e+00

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Expression of SNX10 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SNX10

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SNX10

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SNX10hsa-miR-4799-5p97.7164NM_001199837
SNX10hsa-miR-582-5p95.7427NM_001199837
SNX10hsa-miR-551b-5p95.0944NM_001199837
SNX10hsa-miR-426395.0631NM_001318199
SNX10hsa-miR-7152-5p93.4119NM_001199837
SNX10hsa-miR-513a-5p93.1738NM_001199837
SNX10hsa-miR-477591.3665NM_001199837
SNX10hsa-miR-27b-3p91.3413NM_001199837
SNX10hsa-miR-998591.3413NM_001199837
SNX10hsa-miR-27a-3p91.3413NM_001199837
SNX10hsa-miR-30e-5p90.2722NM_001318199
SNX10hsa-miR-30c-5p90.2722NM_001318199
SNX10hsa-miR-30a-5p90.2722NM_001318199
SNX10hsa-miR-30b-5p90.2722NM_001318199
SNX10hsa-miR-30d-5p90.2722NM_001318199
SNX10hsa-miR-576-5p89.2994NM_001318199
SNX10hsa-miR-365888.5329NM_001199837
SNX10hsa-miR-80288.2622NM_001199837
SNX10hsa-miR-6509-5p87.0214NM_001199837
SNX10hsa-miR-7161-5p86.4114NM_001199837
SNX10hsa-miR-548u85.5258NM_001199837
SNX10hsa-miR-58785.5065NM_001318199
SNX10hsa-miR-942-5p82.2885NM_001199837
SNX10hsa-miR-627-3p81.748NM_001318199
SNX10hsa-miR-449581.3464NM_001318199
SNX10hsa-miR-570-3p81.1114NM_001199837
SNX10hsa-miR-33a-3p81.0661NM_001199837
SNX10hsa-miR-6504-3p80.0803NM_001199837
SNX10hsa-miR-10399-5p80.0803NM_001199837
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Motifs and transcription factors (TFs) regulating SNX10

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SNX10metacluster_22.19NFE2 (directAnnotation).
SNX10metacluster_22.32NFE2L2 (directAnnotation).
SNX10metacluster_147.3MGA; MGA; TBX1; TBX15; TBX15; TBX18; TBX19; TBX20; TBX20; TBX20; TBX21; TBX22; ZNF18; ZNF18; ZNF18; ZNF18 (directAnnotation). MGA; TBX21 (inferredBy_Orthology).
SNX10kznf__ZNF547_Imbeault2017_OM_MEMEZNF547 (directAnnotation).
SNX10metacluster_22.36BACH2 (directAnnotation).
SNX10transfac_pro__M05612ZNF189 (directAnnotation).
SNX10transfac_pro__M06042ZNF208 (directAnnotation).
SNX10transfac_public__M00208NFKB1; RELA (directAnnotation).
SNX10metacluster_22.12NFE2; NFE2L1 (directAnnotation).
SNX10transfac_pro__M06402ZNF493 (directAnnotation).
SNX10kznf__ZNF584_Imbeault2017_OM_RCADEZNF584 (directAnnotation).
SNX10metacluster_22.20MAFG (directAnnotation).
SNX10metacluster_30.4BACH1; BACH1; MAFG; MAFG; NFE2; NFE2; NFE2L1; NFE2L1; NFE2L2 (directAnnotation).
SNX10metacluster_22.17NFE2 (directAnnotation).
SNX10tfdimers__MD00095ELF1; NEUROD1 (directAnnotation).
SNX10metacluster_22.25NFE2L2 (directAnnotation).
SNX10metacluster_22.18BACH2 (inferredBy_Orthology).
SNX10metacluster_31.7FOXO1; FOXO3; FOXO6 (directAnnotation).
SNX10tfdimers__MD00031MYB; ZEB1 (directAnnotation).
SNX10transfac_pro__M05897ZNF561 (directAnnotation).
SNX10transfac_pro__M05613ZNF35 (directAnnotation).
SNX10transfac_pro__M06007ZNF69 (directAnnotation).
SNX10kznf__ZNF785_Imbeault2017_OM_MEMEZNF785 (directAnnotation).
SNX10cisbp__M02096ANHX (directAnnotation).
SNX10transfac_pro__M06070ZNF732 (directAnnotation).
SNX10transfac_pro__M05453ZBTB26 (directAnnotation).
SNX10swissregulon__hs__ZNF784ZNF784 (directAnnotation).
SNX10transfac_pro__M06712ZNF287 (directAnnotation).
SNX10metacluster_134.6FOXF1; FOXG1; ZNF74 (directAnnotation). FOXG1 (inferredBy_Orthology).
SNX10tfdimers__MD00295EBF1; STAT6 (directAnnotation).
SNX10kznf__ZNF445_Imbeault2017_OM_MEMEZNF445 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."