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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RALGPS2

Summary for RALGPS2

Gene informationGene symbol

RALGPS2

Ensembl ID

ENSG00000116191

Entrez ID

55103

Gene nameRal GEF with PH domain and SH3 binding motif 2
SynonymsFLJ10244|FLJ25604|KIAA0351
Gene typeprotein_coding
UniProtAcc

Q86X27


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Dataset with differentially expressed gene: RALGPS2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.3997297.01e-45

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.6939352.91e-30

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postB cells-0.4919954.15e-06

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.5663020.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostB cells1.324554.26e-03

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMalignant cells0.2781980.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4555890.00e+00

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Expression of RALGPS2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RALGPS2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RALGPS2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RALGPS2hsa-miR-454-3p98.1452NM_152663
RALGPS2hsa-miR-3942-3p97.9448NM_152663
RALGPS2hsa-miR-4760-3p97.7626NM_152663
RALGPS2hsa-miR-94496.8852NM_152663
RALGPS2hsa-miR-21-5p96.8039NM_152663
RALGPS2hsa-miR-5002-5p96.4679NM_152663
RALGPS2hsa-miR-590-5p96.0857NM_152663
RALGPS2hsa-miR-301a-3p95.9653NM_152663
RALGPS2hsa-miR-429595.9653NM_152663
RALGPS2hsa-miR-130a-3p95.9653NM_152663
RALGPS2hsa-miR-366695.9653NM_152663
RALGPS2hsa-miR-301b-3p95.9653NM_152663
RALGPS2hsa-miR-130b-3p95.9653NM_152663
RALGPS2hsa-miR-5579-3p95.6286NM_152663
RALGPS2hsa-miR-60395.2111NM_152663
RALGPS2hsa-miR-670-5p95.1772NM_152663
RALGPS2hsa-miR-520f-3p95.0889NM_152663
RALGPS2hsa-miR-130b-5p94.4475NM_152663
RALGPS2hsa-miR-1213694.0926NM_152663
RALGPS2hsa-miR-345-3p93.7061NM_152663
RALGPS2hsa-miR-4671-3p93.4243NM_152663
RALGPS2hsa-miR-7-2-3p93.1496NM_152663
RALGPS2hsa-miR-7-1-3p93.1496NM_152663
RALGPS2hsa-miR-590-3p92.7307NM_152663
RALGPS2hsa-miR-3692-3p92.0725NM_152663
RALGPS2hsa-miR-222-5p91.5466NM_152663
RALGPS2hsa-miR-807391.1428NM_152663
RALGPS2hsa-miR-221-5p91.1428NM_152663
RALGPS2hsa-miR-524-5p90.7802NM_152663
RALGPS2hsa-miR-520d-5p90.7802NM_152663
RALGPS2hsa-miR-548au-3p90.7192NM_152663
RALGPS2hsa-miR-33a-3p90.6922NM_152663
RALGPS2hsa-miR-205290.0832NM_152663
RALGPS2hsa-miR-6758-3p89.7771NM_152663
RALGPS2hsa-miR-4482-3p89.7519NM_152663
RALGPS2hsa-miR-4753-3p89.5992NM_152663
RALGPS2hsa-miR-442289.3613NM_152663
RALGPS2hsa-miR-367189.1149NM_152663
RALGPS2hsa-miR-568388.9854NM_152663
RALGPS2hsa-miR-365888.4238NM_152663
RALGPS2hsa-miR-18b-3p88.2559NM_152663
RALGPS2hsa-miR-318287.913NM_152663
RALGPS2hsa-miR-6835-3p87.1467NM_152663
RALGPS2hsa-miR-130a-5p86.7707NM_152663
RALGPS2hsa-miR-377-3p86.7093NM_152663
RALGPS2hsa-miR-4668-3p86.387NM_152663
RALGPS2hsa-miR-153-3p85.9959NM_152663
RALGPS2hsa-miR-1273h-3p85.9395NM_152663
RALGPS2hsa-miR-371485.2365NM_152663
RALGPS2hsa-miR-888-5p85.2343NM_152663
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Motifs and transcription factors (TFs) regulating RALGPS2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RALGPS2transfac_pro__M07397ZNF148 (directAnnotation).
RALGPS2metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
RALGPS2cisbp__M07938E2F1 (directAnnotation).
RALGPS2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
RALGPS2hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
RALGPS2metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
RALGPS2transfac_pro__M01090SMAD9 (inferredBy_Orthology).
RALGPS2transfac_pro__M01837KLF11 (directAnnotation).
RALGPS2hdpi__TP73TP73 (directAnnotation).
RALGPS2taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
RALGPS2metacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
RALGPS2jaspar__MA0748.2YY2 (directAnnotation).
RALGPS2swissregulon__hs__KLF6KLF6 (directAnnotation).
RALGPS2kznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
RALGPS2metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
RALGPS2transfac_pro__M01175ZBTB7B (directAnnotation).
RALGPS2transfac_pro__M00716ZBTB14 (directAnnotation).
RALGPS2jaspar__MA1122.1TFDP1 (directAnnotation).
RALGPS2transfac_pro__M07297MAZ (directAnnotation).
RALGPS2metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
RALGPS2metacluster_163.2ZNF682 (directAnnotation).
RALGPS2transfac_pro__M04916TAF1 (directAnnotation).
RALGPS2metacluster_170.1ZNF460; ZNF460; ZNF468; ZNF468 (directAnnotation).
RALGPS2metacluster_3.3KLF10; KLF15; KLF16; KLF9; SP1 (directAnnotation).
RALGPS2transfac_pro__M00938E2F1 (directAnnotation).
RALGPS2transfac_pro__M02090E2F4 (directAnnotation).
RALGPS2kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
RALGPS2hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
RALGPS2swissregulon__hs__CHD1CHD1 (directAnnotation).
RALGPS2transfac_pro__M01303SP1 (directAnnotation).
RALGPS2transfac_pro__M05731ZNF660 (directAnnotation).
RALGPS2transfac_pro__M06539ZNF483 (directAnnotation).
RALGPS2metacluster_52.13LEF1; LEF1; LEF1; LEF1; TCF7; TCF7; TCF7L1; TCF7L1 (directAnnotation).
RALGPS2transfac_pro__M06661ZNF426 (directAnnotation).
RALGPS2taipale__ZNF524_full_ACCCTTGAACCC_reprZNF524 (directAnnotation).
RALGPS2kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
RALGPS2metacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
RALGPS2transfac_pro__M06491ZNF770 (inferredBy_Orthology).
RALGPS2metacluster_155.21ZNF454; ZNF454 (directAnnotation).
RALGPS2taipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_1ELK1; GCM1 (directAnnotation).
RALGPS2taipale_tf_pairs__FLI1_FOXI1_RCCGGATGTTKWY_CAPFLI1; FOXI1 (directAnnotation).
RALGPS2transfac_pro__M06811ZNF528 (directAnnotation).
RALGPS2taipale__CUX1_DBD_ATCRATNNNNNATCRAT_reprCUX1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."