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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: PPP3R1

Summary for PPP3R1

Gene informationGene symbol

PPP3R1

Ensembl ID

ENSG00000221823

Entrez ID

5534

Gene nameprotein phosphatase 3 regulatory subunit B, alpha
SynonymsCALNB1|CNB|CNB1
Gene typeprotein_coding
UniProtAcc

P63098


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Dataset with differentially expressed gene: PPP3R1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.348786.23e-31

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.2818250.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.255630.00e+00

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Expression of PPP3R1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PPP3R1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PPP3R1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PPP3R1hsa-miR-5011-5p99.613NM_000945
PPP3R1hsa-miR-392499.3115NM_000945
PPP3R1hsa-miR-471997.407NM_000945
PPP3R1hsa-miR-30a-5p96.8355NM_000945
PPP3R1hsa-miR-30b-5p96.8355NM_000945
PPP3R1hsa-miR-30e-5p96.8355NM_000945
PPP3R1hsa-miR-30d-5p96.8355NM_000945
PPP3R1hsa-miR-30c-5p96.8355NM_000945
PPP3R1hsa-miR-548ba96.6752NM_000945
PPP3R1hsa-miR-548ai96.6752NM_000945
PPP3R1hsa-miR-548ag96.6752NM_000945
PPP3R1hsa-miR-570-5p96.6752NM_000945
PPP3R1hsa-miR-3944-5p96.6711NM_000945
PPP3R1hsa-miR-5580-3p96.5502NM_000945
PPP3R1hsa-miR-29896.5332NM_000945
PPP3R1hsa-miR-651-3p96.5142NM_000945
PPP3R1hsa-miR-1212496.3113NM_000945
PPP3R1hsa-let-7c-3p96.1759NM_000945
PPP3R1hsa-miR-1212596.0079NM_000945
PPP3R1hsa-miR-316395.9752NM_000945
PPP3R1hsa-miR-450595.5093NM_000945
PPP3R1hsa-miR-578795.5093NM_000945
PPP3R1hsa-miR-4666a-5p95.348NM_000945
PPP3R1hsa-miR-54394.7628NM_000945
PPP3R1hsa-miR-7-1-3p94.5271NM_000945
PPP3R1hsa-miR-7-2-3p94.5271NM_000945
PPP3R1hsa-miR-181c-5p94.2642NM_000945
PPP3R1hsa-miR-181a-5p94.2642NM_000945
PPP3R1hsa-miR-426294.2642NM_000945
PPP3R1hsa-miR-181d-5p94.2642NM_000945
PPP3R1hsa-miR-181b-5p94.2642NM_000945
PPP3R1hsa-miR-491-3p93.8651NM_000945
PPP3R1hsa-miR-548ar-3p93.6769NM_000945
PPP3R1hsa-miR-190a-3p93.3748NM_000945
PPP3R1hsa-miR-520d-5p93.23NM_000945
PPP3R1hsa-miR-524-5p93.23NM_000945
PPP3R1hsa-miR-96-5p92.7543NM_000945
PPP3R1hsa-miR-105-5p92.5787NM_000945
PPP3R1hsa-miR-7853-5p92.5787NM_000945
PPP3R1hsa-miR-377-3p92.4841NM_000945
PPP3R1hsa-miR-1212092.4752NM_000945
PPP3R1hsa-miR-3126-5p92.3371NM_000945
PPP3R1hsa-miR-6875-5p92.3371NM_000945
PPP3R1hsa-miR-451692.2839NM_000945
PPP3R1hsa-miR-6866-3p92.1493NM_000945
PPP3R1hsa-miR-188-5p92.1493NM_000945
PPP3R1hsa-miR-1212392.0338NM_000945
PPP3R1hsa-miR-222-3p91.8766NM_000945
PPP3R1hsa-miR-221-3p91.8766NM_000945
PPP3R1hsa-miR-2467-5p91.8174NM_000945
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Motifs and transcription factors (TFs) regulating PPP3R1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PPP3R1homer__GGGGGGGG_MazMAZ (directAnnotation).
PPP3R1taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
PPP3R1taipale_tf_pairs__GCM1_ERG_RTRYGGGCGGAARKN_CAPERG; GCM1 (directAnnotation).
PPP3R1metacluster_84.2RARA (directAnnotation).
PPP3R1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
PPP3R1metacluster_3.10KLF2; KLF4 (directAnnotation).
PPP3R1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
PPP3R1metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
PPP3R1transfac_pro__M05479ZNF580 (directAnnotation).
PPP3R1jaspar__MA1122.1TFDP1 (directAnnotation).
PPP3R1cisbp__M00341PAX6 (directAnnotation).
PPP3R1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWGNNNNNTCCGGNN_CAPGCM1; SPDEF (directAnnotation).
PPP3R1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
PPP3R1metacluster_35.2EGR1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF3; ELF4; ELF4; ELK1; ELK3; ELK4; ERG; ETS1; ETS1; ETS2; ETV1; ETV1; ETV5; ETV5; ETV6; FLI1; FLI1; GABPA; GABPA; GABPA; GABPB1; GABPB1; GABPB1; ZBTB7A (directAnnotation). ELF2; ELF2; ERG; ERG; ETS2; FLI1; GABPA; IKZF3; SPIC (inferredBy_Orthology).
PPP3R1tfdimers__MD00151CHURC1 (directAnnotation).
PPP3R1tfdimers__MD00391KLF4 (directAnnotation).
PPP3R1taipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
PPP3R1tfdimers__MD00441OVOL2; RELA (directAnnotation).
PPP3R1metacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
PPP3R1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
PPP3R1metacluster_3.14WT1; WT1 (directAnnotation).
PPP3R1metacluster_24.5ZNF675; ZNF675 (directAnnotation).
PPP3R1transfac_public__M00491PATZ1 (directAnnotation).
PPP3R1transfac_pro__M07397ZNF148 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PPP3R1"Myristic acid"

DB08231

small molecule
PPP3R1"Voclosporin"

DB11693

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."