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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: NAP1L1

Summary for NAP1L1

Gene informationGene symbol

NAP1L1

Ensembl ID

ENSG00000187109

Entrez ID

4673

Gene namenucleosome assembly protein 1 like 1
SynonymsMGC23410|MGC8688|NAP1|NAP1L|NRP
Gene typeprotein_coding
UniProtAcc

P55209


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Dataset with differentially expressed gene: NAP1L1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.2640133.88e-09

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro-0.3253065.58e-28

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.3317182.16e-13

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro-0.4397073.17e-09

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD4+ T cells-0.2867757.92e-06

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro-0.6822082.43e-15

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.491061.86e-19

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells1.008510.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostCD8+ T cells-0.2741730.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMono/Macro-0.2573052.64e-10

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.5262270.00e+00

GSE161195

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapyDARA-KRD (daratumumab + carfilzomib + lenalidomide + dexamethasone)postMalignant cells0.349981.61e-43

GSE158457

PDX cellsCell lineAcute lymphoblastic leukemiaT-cell acute lymphoblastic leukemia (ALL)Targeted therapydasatinibNAMalignant cells-0.3516430.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.7735840.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpreMalignant cells0.4275410.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.3974670.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-1.231446.39e-08

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpostCD8+ T cells-0.2507261.96e-09

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMalignant cells-0.2586270.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells-0.4812020.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.5354181.07e-37

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.4931690.00e+00

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Expression of NAP1L1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NAP1L1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NAP1L1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NAP1L1hsa-miR-450098.7453NM_004537
NAP1L1hsa-miR-3613-3p98.149NM_004537
NAP1L1hsa-let-7e-5p98.1208NM_004537
NAP1L1hsa-let-7g-5p98.1208NM_004537
NAP1L1hsa-let-7c-5p98.1208NM_004537
NAP1L1hsa-miR-98-5p98.1208NM_004537
NAP1L1hsa-let-7i-5p98.1208NM_004537
NAP1L1hsa-let-7a-5p98.1208NM_004537
NAP1L1hsa-let-7f-5p98.1208NM_004537
NAP1L1hsa-let-7b-5p98.1208NM_004537
NAP1L1hsa-miR-445897.8957NM_004537
NAP1L1hsa-let-7d-5p97.8957NM_004537
NAP1L1hsa-miR-541-5p97.2037NM_004537
NAP1L1hsa-miR-548b-3p96.8276NM_004537
NAP1L1hsa-miR-3180-5p96.6341NM_004537
NAP1L1hsa-miR-5584-5p95.4793NM_001307924
NAP1L1hsa-miR-6831-5p95.3324NM_004537
NAP1L1hsa-miR-875-3p95.1093NM_004537
NAP1L1hsa-miR-3927-3p94.3999NM_004537
NAP1L1hsa-miR-511-5p94.122NM_004537
NAP1L1hsa-miR-6830-5p93.9338NM_004537
NAP1L1hsa-miR-202-3p93.3614NM_004537
NAP1L1hsa-miR-676-5p93.0679NM_139207
NAP1L1hsa-miR-314892.7929NM_004537
NAP1L1hsa-miR-590-3p90.9227NM_004537
NAP1L1hsa-miR-805590.4313NM_139207
NAP1L1hsa-miR-7-1-3p90.2694NM_004537
NAP1L1hsa-miR-7-2-3p90.2694NM_004537
NAP1L1hsa-miR-582-5p90.1734NM_004537
NAP1L1hsa-miR-477389.7963NM_004537
NAP1L1hsa-miR-4477a89.2003NM_004537
NAP1L1hsa-miR-335-3p88.7009NM_004537
NAP1L1hsa-miR-3682-3p88.6602NM_001307924
NAP1L1hsa-miR-3922-5p88.6171NM_004537
NAP1L1hsa-miR-450388.3521NM_139207
NAP1L1hsa-miR-181a-2-3p87.7606NM_001307924
NAP1L1hsa-miR-149-5p87.7445NM_001307924
NAP1L1hsa-miR-216a-5p87.6332NM_139207
NAP1L1hsa-miR-196b-5p87.0741NM_004537
NAP1L1hsa-miR-196a-5p87.0741NM_004537
NAP1L1hsa-miR-6515-3p87.0428NM_139207
NAP1L1hsa-miR-135b-3p86.0534NM_001307924
NAP1L1hsa-miR-135a-2-3p86.0534NM_001307924
NAP1L1hsa-miR-4712-5p85.9886NM_004537
NAP1L1hsa-miR-770-5p85.9886NM_004537
NAP1L1hsa-miR-451185.5415NM_139207
NAP1L1hsa-miR-5195-3p85.4465NM_004537
NAP1L1hsa-miR-145-5p85.4465NM_004537
NAP1L1hsa-miR-6748-3p85.1236NM_004537
NAP1L1hsa-miR-548x-3p85.1148NM_004537
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Motifs and transcription factors (TFs) regulating NAP1L1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NAP1L1homer__AAGGKGRCGCAGGCA_ZNF165ZNF165 (directAnnotation).
NAP1L1taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
NAP1L1jaspar__MA1122.1TFDP1 (directAnnotation).
NAP1L1taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
NAP1L1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
NAP1L1metacluster_35.2EGR1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF3; ELF4; ELF4; ELK1; ELK3; ELK4; ERG; ETS1; ETS1; ETS2; ETV1; ETV1; ETV5; ETV5; ETV6; FLI1; FLI1; GABPA; GABPA; GABPA; GABPB1; GABPB1; GABPB1; ZBTB7A (directAnnotation). ELF2; ELF2; ERG; ERG; ETS2; FLI1; GABPA; IKZF3; SPIC (inferredBy_Orthology).
NAP1L1tfdimers__MD00151CHURC1 (directAnnotation).
NAP1L1tfdimers__MD00391KLF4 (directAnnotation).
NAP1L1taipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
NAP1L1tfdimers__MD00441OVOL2; RELA (directAnnotation).
NAP1L1metacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
NAP1L1metacluster_126.3LIN28B; LIN28B (directAnnotation).
NAP1L1transfac_pro__M01973PLAG1 (directAnnotation).
NAP1L1transfac_pro__M12697ZNF142 (directAnnotation).
NAP1L1metacluster_196.3NR1H4; NR2F6; PRDM14; ZNF264; ZNF264 (directAnnotation). HNF4A; HNF4G; NR1D1; NR1D1; NR1D1; NR1D2; NR1D2; NR1D2; NR1H2; NR1H2; NR1H2; NR1H3; NR1H3; NR1H3; NR1I2; NR1I2; NR1I2; NR2C1; NR2C2; NR2F2; NR2F6; PPARA; PPARA; PPARA; PPARD; PPARD; PPARD; PPARG; PPARG; PPARG; RARA; RARA; RARA; RARB; RARB; RARB; RORA; RORA; RORA; RORB; RORB; RORB; RORC; RORC; RORC; RXRA; RXRB; RXRG; THRA; THRA; THRA; VDR; VDR; VDR (inferredBy_Orthology).
NAP1L1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
NAP1L1jaspar__MA0748.2YY2 (directAnnotation).
NAP1L1transfac_pro__M01303SP1 (directAnnotation).
NAP1L1kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
NAP1L1metacluster_3.14WT1; WT1 (directAnnotation).
NAP1L1metacluster_24.5ZNF675; ZNF675 (directAnnotation).
NAP1L1transfac_public__M00491PATZ1 (directAnnotation).
NAP1L1taipale_tf_pairs__ETV5_EOMES_RNGTGNNNNNNNNNNNNNRCRCCGGAWSN_CAPEOMES; ETV5 (directAnnotation).
NAP1L1metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
NAP1L1transfac_pro__M07397ZNF148 (directAnnotation).
NAP1L1transfac_pro__M06259ZNF91 (directAnnotation).
NAP1L1hdpi__ZNF76ZNF76 (directAnnotation).
NAP1L1taipale_tf_pairs__ETV2_HOXB13_NCCGGAAGTYRTAAAN_CAPETV2; HOXB13 (directAnnotation).
NAP1L1metacluster_45.6E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F4; E2F4 (directAnnotation). E2F2; E2F3 (inferredBy_Orthology).
NAP1L1transfac_pro__M05474ZNF639 (directAnnotation).
NAP1L1cisbp__M00808MYPOP (inferredBy_Orthology).
NAP1L1transfac_pro__M05529ZBTB5 (inferredBy_Orthology).
NAP1L1metacluster_113.3MYBL1; MYBL1; MYBL2; MYBL2; OVOL1; OVOL2 (directAnnotation). MYB; MYBL1; MYBL1; MYBL1; MYBL1; MYBL2; OVOL1 (inferredBy_Orthology).
NAP1L1hdpi__MLXMLX (directAnnotation).
NAP1L1taipale_tf_pairs__MYBL1_EOMES_NNSYGNCNAACNNNNNNCACRCNN_CAP_reprEOMES; MYBL1 (directAnnotation).
NAP1L1hocomoco__E2F8_HUMAN.H11MO.0.DE2F8 (directAnnotation).
NAP1L1transfac_pro__M06096ZNF682 (directAnnotation).
NAP1L1taipale_cyt_meth__ZBTB2_NTTTMCGGTWAN_eDBDZBTB2 (directAnnotation).
NAP1L1taipale_cyt_meth__NKX2-3_NTCGTTGAN_eDBD_methNKX2-3 (directAnnotation).
NAP1L1metacluster_144.9SP2 (directAnnotation).
NAP1L1jaspar__MA0863.1MTF1 (directAnnotation).
NAP1L1transfac_pro__M07362NANOG (directAnnotation). NANOGP8 (inferredBy_Orthology).
NAP1L1transfac_pro__M06473ZNF440 (directAnnotation).
NAP1L1metacluster_140.1BCL11B; BCL11B (directAnnotation).
NAP1L1taipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
NAP1L1transfac_pro__M06863ZNF789 (directAnnotation).
NAP1L1kznf__ZNF441_Imbeault2017_OM_RCADEZNF441 (directAnnotation).
NAP1L1taipale_tf_pairs__E2F3_HES7_NNNNGCGCSNNNNNCACGTGNN_CAPE2F3; HES7 (directAnnotation).
NAP1L1transfac_pro__M02089E2F3 (directAnnotation).
NAP1L1taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."