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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: HNRNPD

Summary for HNRNPD

Gene informationGene symbol

HNRNPD

Ensembl ID

ENSG00000138668

Entrez ID

3184

Gene nameheterogeneous nuclear ribonucleoprotein D
SynonymsAUF1|HNRPD
Gene typeprotein_coding
UniProtAcc

Q14103


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Dataset with differentially expressed gene: HNRNPD

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.550180.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.2709617.06e-09

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.4209541.14e-17

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.5596426.72e-26

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.4789220.00e+00

GSE158457

PDX cellsCell lineAcute lymphoblastic leukemiaT-cell acute lymphoblastic leukemia (ALL)Targeted therapydasatinibNAMalignant cells-0.2790580.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.2608192.99e-33

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.2699543.22e-31

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.2815480.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.5363360.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.4154950.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells-0.3888651.10e-04

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.6233190.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.5246752.52e-30

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.8296490.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.5641354.56e-37

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3264940.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.5766630.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.379720.00e+00

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Expression of HNRNPD in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to HNRNPD

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating HNRNPD

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
HNRNPDhsa-miR-4482-3p96.5283NM_031369
HNRNPDhsa-miR-495-5p96.0613NM_001003810
HNRNPDhsa-miR-365894.3599NM_031369
HNRNPDhsa-miR-4684-3p94.3458NM_031369
HNRNPDhsa-miR-382-5p93.6681NM_001003810
HNRNPDhsa-let-7f-1-3p92.9331NM_001003810
HNRNPDhsa-miR-98-3p92.9331NM_001003810
HNRNPDhsa-let-7b-3p92.9331NM_001003810
HNRNPDhsa-let-7a-3p92.9331NM_001003810
HNRNPDhsa-miR-203b-3p91.3232NM_001003810
HNRNPDhsa-miR-146b-5p89.4512NM_031369
HNRNPDhsa-miR-146a-5p89.4512NM_031369
HNRNPDhsa-miR-7153-5p89.4512NM_031369
HNRNPDhsa-miR-1212389.1993NM_001003810
HNRNPDhsa-miR-6857-5p89.1703NM_031369
HNRNPDhsa-miR-607988.8022NM_031369
HNRNPDhsa-miR-10527-5p88.0157NM_001003810
HNRNPDhsa-miR-4703-5p86.8562NM_001003810
HNRNPDhsa-miR-6739-3p85.0245NM_031369
HNRNPDhsa-miR-4766-3p84.5341NM_031369
HNRNPDhsa-miR-50784.4335NM_031369
HNRNPDhsa-miR-3942-5p84.3808NM_001003810
HNRNPDhsa-miR-390884.3808NM_001003810
HNRNPDhsa-miR-6828-5p83.7868NM_031369
HNRNPDhsa-miR-4477a83.0824NM_001003810
HNRNPDhsa-miR-445282.7504NM_031369
HNRNPDhsa-miR-471982.3203NM_001003810
HNRNPDhsa-miR-200c-3p80.714NM_001003810
HNRNPDhsa-miR-200b-3p80.714NM_001003810
HNRNPDhsa-miR-42980.714NM_001003810
HNRNPDhsa-miR-314780.5965NM_031369
HNRNPDhsa-miR-211-3p80.3353NM_031369
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Motifs and transcription factors (TFs) regulating HNRNPD

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
HNRNPDtaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
HNRNPDtransfac_pro__M01303SP1 (directAnnotation).
HNRNPDtransfac_public__M00491PATZ1 (directAnnotation).
HNRNPDmetacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
HNRNPDtransfac_pro__M07397ZNF148 (directAnnotation).
HNRNPDjaspar__MA1708.1ETV7 (directAnnotation).
HNRNPDtaipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
HNRNPDmetacluster_57.3ARNT; ATF3; ATF3; ATF3; ATF3; BHLHE40; BHLHE40; BHLHE40; BHLHE41; BHLHE41; BHLHE41; MITF; MITF; MITF; MLX; MLXIPL; SREBF1; SREBF1; SREBF1; SREBF1; SREBF2; SREBF2; SREBF2; TFE3; TFEC; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; ZNF507 (directAnnotation). ARNTL; BHLHE40; BHLHE40; BHLHE41; HELT; HES1; HES2; HES3; HES5; HES6; HES7; HEY1; HEY2; HEYL; MLX; MLX; SREBF1; SREBF2; TFE3; USF1; USF1; USF2; USF2 (inferredBy_Orthology).
HNRNPDjaspar__MA1932.1HOXB13 (directAnnotation).
HNRNPDtaipale_tf_pairs__TEAD4_ETV1_RSCGGAAATRCM_CAPETV1; TEAD4 (directAnnotation).
HNRNPDmetacluster_81.7CREB1 (directAnnotation).
HNRNPDtaipale_tf_pairs__ETV2_FOXI1_RSCGGATGTTKW_CAPETV2; FOXI1 (directAnnotation).
HNRNPDtaipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
HNRNPDmetacluster_45.6E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F4; E2F4 (directAnnotation). E2F2; E2F3 (inferredBy_Orthology).
HNRNPDtransfac_pro__M01182HINFP (directAnnotation).
HNRNPDtransfac_pro__M06660ZNF670 (directAnnotation).
HNRNPDtransfac_pro__M06991MAFF (directAnnotation).
HNRNPDhocomoco__E2F8_HUMAN.H11MO.0.DE2F8 (directAnnotation).
HNRNPDhomer__TACGTGCV_HIF-1aHIF1A (directAnnotation).
HNRNPDtaipale_tf_pairs__ERF_HES7_NCCGGAANNNNNNCACGYGNN_CAP_reprERF; HES7 (directAnnotation).
HNRNPDmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
HNRNPDtransfac_pro__M02090E2F4 (directAnnotation).
HNRNPDkznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
HNRNPDdbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
HNRNPDkznf__ZNF846_Imbeault2017_RP_ChIP-seqZNF846 (directAnnotation).
HNRNPDmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
HNRNPDtaipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
HNRNPDkznf__ZNF548_Imbeault2017_OM_RCADEZNF548 (directAnnotation).
HNRNPDtransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
HNRNPDmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
HNRNPDkznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
HNRNPDtaipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
HNRNPDtransfac_pro__M04817ZBTB33 (directAnnotation).
HNRNPDtransfac_pro__M02089E2F3 (directAnnotation).
HNRNPDmetacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
HNRNPDtransfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
HNRNPDhdpi__NRLNRL (directAnnotation).
HNRNPDhomer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
HNRNPDtransfac_pro__M07329SP7 (directAnnotation).
HNRNPDmetacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
HNRNPDhocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
HNRNPDtransfac_pro__M07436WT1 (directAnnotation).
HNRNPDtransfac_pro__M01837KLF11 (directAnnotation).
HNRNPDtransfac_pro__M02844BCL6B (inferredBy_Orthology).
HNRNPDtransfac_pro__M07310SP5 (directAnnotation).
HNRNPDtaipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
HNRNPDswissregulon__hs__KLF6KLF6 (directAnnotation).
HNRNPDtransfac_pro__M00716ZBTB14 (directAnnotation).
HNRNPDmetacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
HNRNPDtransfac_pro__M04916TAF1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
HNRNPD"Artenimol"

DB11638

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."