DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: CHMP2B

Summary for CHMP2B

Gene informationGene symbol

CHMP2B

Ensembl ID

ENSG00000083937

Entrez ID

25978

Gene namecharged multivesicular body protein 2B
SynonymsCHMP2.5|DKFZP564O123|VPS2B
Gene typeprotein_coding
UniProtAcc

Q9UQN3


Top

Dataset with differentially expressed gene: CHMP2B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.2557796.32e-36

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.2583670.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.4751961.51e-35

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.4244651.11e-17

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.4367031.78e-22

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.3417656.82e-10

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-1.061940.00e+00

Top

Expression of CHMP2B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to CHMP2B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating CHMP2B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CHMP2Bhsa-miR-153-5p99.8665NM_001244644
CHMP2Bhsa-miR-9983-3p97.4602NM_014043
CHMP2Bhsa-miR-129-5p97.1701NM_014043
CHMP2Bhsa-miR-684496.6979NM_001244644
CHMP2Bhsa-miR-5692a95.7978NM_001244644
CHMP2Bhsa-miR-449095.2381NM_001244644
CHMP2Bhsa-miR-3680-3p95.1586NM_014043
CHMP2Bhsa-miR-450b-5p95.0628NM_014043
CHMP2Bhsa-miR-7157-3p94.5381NM_014043
CHMP2Bhsa-miR-6737-3p94.5381NM_014043
CHMP2Bhsa-miR-548aj-5p94.1962NM_014043
CHMP2Bhsa-miR-548f-5p94.1962NM_014043
CHMP2Bhsa-miR-548g-5p94.1962NM_014043
CHMP2Bhsa-miR-548x-5p94.1962NM_014043
CHMP2Bhsa-miR-5008-3p94.1228NM_014043
CHMP2Bhsa-miR-10527-5p92.8199NM_014043
CHMP2Bhsa-miR-127692.2769NM_014043
CHMP2Bhsa-miR-432890.8391NM_014043
CHMP2Bhsa-miR-182-5p89.7515NM_014043
CHMP2Bhsa-miR-4760-3p89.4705NM_014043
CHMP2Bhsa-miR-125688.9982NM_014043
CHMP2Bhsa-miR-9-5p88.8707NM_001244644
CHMP2Bhsa-miR-1250-3p88.1031NM_001244644
CHMP2Bhsa-miR-30c-5p86.6574NM_014043
CHMP2Bhsa-miR-30e-5p86.6574NM_014043
CHMP2Bhsa-miR-30a-5p86.6574NM_014043
CHMP2Bhsa-miR-30d-5p86.6574NM_014043
CHMP2Bhsa-miR-30b-5p86.6574NM_014043
CHMP2Bhsa-miR-5197-5p86.5341NM_014043
CHMP2Bhsa-miR-205-3p85.9025NM_001244644
CHMP2Bhsa-miR-568085.7025NM_001244644
CHMP2Bhsa-miR-548p85.3688NM_014043
CHMP2Bhsa-miR-46684.9069NM_014043
CHMP2Bhsa-miR-426283.9572NM_014043
CHMP2Bhsa-miR-428283.6746NM_014043
CHMP2Bhsa-miR-427683.616NM_014043
CHMP2Bhsa-miR-1468-3p83.3953NM_014043
CHMP2Bhsa-miR-392683.3564NM_014043
CHMP2Bhsa-miR-50783.142NM_014043
CHMP2Bhsa-miR-548m82.3233NM_014043
CHMP2Bhsa-miR-4793-3p81.1858NM_014043
CHMP2Bhsa-miR-6776-3p80.9088NM_014043
CHMP2Bhsa-miR-181a-5p80.7143NM_014043
CHMP2Bhsa-miR-181b-5p80.7143NM_014043
CHMP2Bhsa-miR-181c-5p80.7143NM_014043
CHMP2Bhsa-miR-181d-5p80.7143NM_014043
CHMP2Bhsa-miR-120880.5636NM_014043
Page: 1

Top

Motifs and transcription factors (TFs) regulating CHMP2B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CHMP2Bmetacluster_81.7CREB1 (directAnnotation).
CHMP2Btransfac_pro__M00492STAT1 (directAnnotation).
CHMP2Btaipale_tf_pairs__GCM1_ELF1_NRCCCRNNCGGAAGNN_CAP_reprELF1; GCM1 (directAnnotation).
CHMP2Btransfac_pro__M04748GABPA (directAnnotation).
Page: 1 2 3

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."