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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: WIPF1

Summary for WIPF1

Gene informationGene symbol

WIPF1

Ensembl ID

ENSG00000115935

Entrez ID

7456

Gene nameWAS/WASL interacting protein family member 1
SynonymsWASPIP|WIP
Gene typeprotein_coding
UniProtAcc

O43516


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Dataset with differentially expressed gene: WIPF1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.2805840.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.325840.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.329020.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.4398599.28e-19

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD4+ T cells0.2601510.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreNK cells0.2817882.71e-32

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD8+ T cells0.4141028.70e-09

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.3987019.86e-42

GSE164237

patientsPeripheral blood mononuclear cellsMelanomaAdvanced stages of melanoma ImmunotherapypembrolizumabpreCD8+ T cells-0.2892040.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.3880432.16e-15

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.263790.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.3447990.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.6330870.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.271350.00e+00

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Expression of WIPF1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to WIPF1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating WIPF1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
WIPF1hsa-miR-316399.766NM_001077269
WIPF1hsa-miR-200c-3p99.2486NM_001077269
WIPF1hsa-miR-200b-3p99.2486NM_001077269
WIPF1hsa-miR-42999.2486NM_001077269
WIPF1hsa-miR-568099.1286NM_001077269
WIPF1hsa-miR-3942-3p95.1324NM_003387
WIPF1hsa-miR-203a-5p93.8417NM_001077269
WIPF1hsa-miR-428293.7181NM_001077269
WIPF1hsa-miR-7-2-3p93.231NM_001077269
WIPF1hsa-miR-7-1-3p93.231NM_001077269
WIPF1hsa-miR-6500-3p91.5005NM_003387
WIPF1hsa-miR-6809-5p91.2347NM_001077269
WIPF1hsa-miR-153-3p89.8906NM_001077269
WIPF1hsa-miR-60789.8884NM_001077269
WIPF1hsa-miR-428389.7256NM_003387
WIPF1hsa-miR-4790-3p89.6471NM_003387
WIPF1hsa-miR-494-3p89.0822NM_003387
WIPF1hsa-miR-1211789.0014NM_001077269
WIPF1hsa-miR-568888.5094NM_001077269
WIPF1hsa-miR-124-3p88.1882NM_001077269
WIPF1hsa-miR-506-3p88.1882NM_001077269
WIPF1hsa-miR-593-5p86.9416NM_001077269
WIPF1hsa-miR-9851-3p86.9416NM_001077269
WIPF1hsa-miR-495-3p86.5711NM_001077269
WIPF1hsa-miR-1266-5p86.365NM_003387
WIPF1hsa-miR-451886.365NM_003387
WIPF1hsa-miR-2681-5p85.3941NM_001077269
WIPF1hsa-miR-30b-5p85.3898NM_001077269
WIPF1hsa-miR-30a-5p85.3898NM_001077269
WIPF1hsa-miR-30d-5p85.3898NM_001077269
WIPF1hsa-miR-30e-5p85.3898NM_001077269
WIPF1hsa-miR-30c-5p85.3898NM_001077269
WIPF1hsa-miR-6504-3p85.2684NM_003387
WIPF1hsa-miR-10399-5p85.2684NM_003387
WIPF1hsa-miR-655-3p85.2389NM_001077269
WIPF1hsa-miR-374c-5p85.2389NM_001077269
WIPF1hsa-miR-6797-5p85.1335NM_003387
WIPF1hsa-miR-1249-5p85.1335NM_003387
WIPF1hsa-miR-1212884.5078NM_003387
WIPF1hsa-miR-451984.4811NM_003387
WIPF1hsa-miR-1277-5p83.945NM_003387
WIPF1hsa-miR-364683.8605NM_003387
WIPF1hsa-miR-4668-5p82.6686NM_001077269
WIPF1hsa-miR-123182.1111NM_003387
WIPF1hsa-miR-570081.3462NM_003387
WIPF1hsa-miR-3121-3p81.1796NM_001077269
WIPF1hsa-miR-524-5p80.9103NM_001077269
WIPF1hsa-miR-520d-5p80.9103NM_001077269
WIPF1hsa-miR-311980.868NM_001077269
WIPF1hsa-miR-477980.7474NM_003387
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Motifs and transcription factors (TFs) regulating WIPF1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
WIPF1metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
WIPF1metacluster_191.5SPDEF (inferredBy_Orthology).
WIPF1taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
WIPF1hdpi__TIMELESSTIMELESS (directAnnotation).
WIPF1transfac_pro__M04893TAF1 (directAnnotation).
WIPF1cisbp__M00249WT1 (directAnnotation).
WIPF1transfac_pro__M00430E2F1 (directAnnotation).
WIPF1transfac_pro__M01090SMAD9 (inferredBy_Orthology).
WIPF1hdpi__ZNF304ZNF304 (directAnnotation).
WIPF1metacluster_66.4ARNT2; NR0B1; NR0B1; ZSCAN5A; ZSCAN5A (directAnnotation). ARNT2 (inferredBy_Orthology).
WIPF1transfac_pro__M00938E2F1 (directAnnotation).
WIPF1metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
WIPF1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
WIPF1metacluster_161.4LHX9 (directAnnotation).
WIPF1taipale_tf_pairs__ETV2_TEF_RSCGGAWNTTRCGYAAN_CAPETV2; TEF (directAnnotation).
WIPF1kznf__ZNF441_Imbeault2017_OM_RCADEZNF441 (directAnnotation).
WIPF1metacluster_161.3LHX9 (directAnnotation).
WIPF1metacluster_2.6IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF2; IRF2; IRF2; IRF2; IRF2; IRF2; IRF2; IRF3; IRF3; IRF3; IRF3; IRF3; IRF3; IRF4; IRF4; IRF4; IRF4; IRF4; IRF5; IRF5; IRF5; IRF5; IRF5; IRF5; IRF5; IRF6; IRF7; IRF7; IRF7; IRF7; IRF7; IRF7; IRF7; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF9; IRF9; IRF9; IRF9; IRF9; IRF9; IRF9; STAT1; STAT2; STAT2; STAT2; STAT2; ZNF426; ZNF71 (directAnnotation). IRF1; IRF1; IRF3; IRF8 (inferredBy_Orthology).
WIPF1taipale_tf_pairs__FLI1_FOXI1_GAAAACCGAAAN_CAP_reprFLI1; FOXI1 (directAnnotation).
WIPF1metacluster_32.25ZNF287 (directAnnotation).
WIPF1dbtfbs__ZSCAN16_HEK293_ENCSR864VJE_merged_N1ZSCAN16 (directAnnotation).
WIPF1metacluster_130.2ZNF182; ZNF22; ZNF225; ZNF225; ZNF285; ZNF362; ZNF362; ZNF384; ZNF487; ZNF512; ZNF570; ZNF613 (directAnnotation). ZNF384 (inferredBy_Orthology).
WIPF1transfac_pro__M05521ZNF398 (directAnnotation).
WIPF1taipale_tf_pairs__FOXO1_ELF1_NNGAAAACCGAANM_CAPELF1; FOXO1 (directAnnotation).
WIPF1transfac_pro__M06592ZNF486 (directAnnotation).
WIPF1cisbp__M00767ZSCAN10 (inferredBy_Orthology).
WIPF1transfac_public__M00051NFKB1 (directAnnotation).
WIPF1hdpi__NRLNRL (directAnnotation).
WIPF1flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
WIPF1hdpi__FEZF2FEZF2 (directAnnotation).
WIPF1transfac_pro__M07310SP5 (directAnnotation).
WIPF1metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
WIPF1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
WIPF1metacluster_155.11SPZ1 (directAnnotation).
WIPF1swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
WIPF1hdpi__HTATIP2HTATIP2 (directAnnotation).
WIPF1transfac_pro__M01240GTF2IRD1 (directAnnotation).
WIPF1idmmpmm__MadSMAD9 (inferredBy_Orthology).
WIPF1taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
WIPF1cisbp__M07938E2F1 (directAnnotation).
WIPF1transfac_pro__M02933ZBTB14 (inferredBy_Orthology).
WIPF1taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
WIPF1tfdimers__MD00483ZBTB14 (directAnnotation).
WIPF1transfac_pro__M07317CTBP1 (directAnnotation).
WIPF1transfac_pro__M12697ZNF142 (directAnnotation).
WIPF1transfac_pro__M00716ZBTB14 (directAnnotation).
WIPF1transfac_pro__M03806ZBTB7C (directAnnotation).
WIPF1jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
WIPF1transfac_pro__M04916TAF1 (directAnnotation).
WIPF1hdpi__RARARARA (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."