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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: UBR5

Summary for UBR5

Gene informationGene symbol

UBR5

Ensembl ID

ENSG00000104517

Entrez ID

51366

Gene nameubiquitin protein ligase E3 component n-recognin 5
SynonymsDD5|EDD|EDD1|HYD|KIAA0896
Gene typeprotein_coding
UniProtAcc

O95071


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Dataset with differentially expressed gene: UBR5

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3078913.01e-21

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.2611290.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.7608240.00e+00

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Expression of UBR5 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to UBR5

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

UBR5

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating UBR5

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
UBR5hsa-miR-394199.2769NM_015902
UBR5hsa-miR-1213698.4183NM_015902
UBR5hsa-miR-467297.8291NM_015902
UBR5hsa-miR-548az-5p97.4734NM_015902
UBR5hsa-miR-548t-5p97.4734NM_015902
UBR5hsa-miR-548p97.1748NM_015902
UBR5hsa-miR-366297.1537NM_015902
UBR5hsa-miR-216a-3p96.9361NM_015902
UBR5hsa-miR-128-3p96.9361NM_015902
UBR5hsa-miR-7156-5p96.3418NM_015902
UBR5hsa-miR-427396.1507NM_015902
UBR5hsa-miR-3681-3p96.1269NM_015902
UBR5hsa-miR-128396.0816NM_015902
UBR5hsa-miR-1468-3p95.4346NM_015902
UBR5hsa-let-7c-3p95.417NM_015902
UBR5hsa-miR-449c-3p94.8077NM_015902
UBR5hsa-miR-589-3p94.7953NM_015902
UBR5hsa-miR-318294.5277NM_015902
UBR5hsa-miR-223-3p94.5126NM_015902
UBR5hsa-miR-642a-5p93.0107NM_015902
UBR5hsa-miR-545-3p92.8459NM_015902
UBR5hsa-miR-548c-3p92.0857NM_015902
UBR5hsa-miR-153-5p91.4604NM_015902
UBR5hsa-miR-46690.7514NM_015902
UBR5hsa-miR-548n90.6751NM_015902
UBR5hsa-miR-4659b-3p90.587NM_015902
UBR5hsa-miR-4659a-3p90.587NM_015902
UBR5hsa-miR-7-5p90.2012NM_015902
UBR5hsa-miR-371b-3p89.5471NM_015902
UBR5hsa-miR-524-5p89.3535NM_015902
UBR5hsa-miR-520d-5p89.3535NM_015902
UBR5hsa-miR-140-5p88.5668NM_015902
UBR5hsa-miR-6842-3p87.9146NM_015902
UBR5hsa-miR-548aj-3p87.5621NM_015902
UBR5hsa-miR-548x-3p87.5621NM_015902
UBR5hsa-miR-2277-3p87.2765NM_015902
UBR5hsa-miR-548d-3p87.2125NM_015902
UBR5hsa-miR-30d-3p86.6025NM_015902
UBR5hsa-miR-30a-3p86.6025NM_015902
UBR5hsa-miR-30e-3p86.6025NM_015902
UBR5hsa-miR-371485.5573NM_015902
UBR5hsa-miR-1212985.4067NM_015902
UBR5hsa-miR-548bb-3p85.2942NM_015902
UBR5hsa-miR-6513-5p85.2141NM_015902
UBR5hsa-miR-4666a-5p84.6943NM_015902
UBR5hsa-miR-393884.6657NM_015902
UBR5hsa-miR-568983.6978NM_015902
UBR5hsa-miR-27b-3p83.6414NM_015902
UBR5hsa-miR-27a-3p83.6414NM_015902
UBR5hsa-miR-998583.6414NM_015902
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Motifs and transcription factors (TFs) regulating UBR5

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
UBR5homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
UBR5metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
UBR5transfac_pro__M01253CNOT3 (directAnnotation).
UBR5dbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
UBR5metacluster_3.10KLF2; KLF4 (directAnnotation).
UBR5metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
UBR5jaspar__MA1721.1ZNF93 (directAnnotation).
UBR5metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
UBR5swissregulon__hs__CHD1CHD1 (directAnnotation).
UBR5homer__AAGGKGRCGCAGGCA_ZNF165ZNF165 (directAnnotation).
UBR5taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
UBR5jaspar__MA1122.1TFDP1 (directAnnotation).
UBR5taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
UBR5metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
UBR5metacluster_35.2EGR1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF3; ELF4; ELF4; ELK1; ELK3; ELK4; ERG; ETS1; ETS1; ETS2; ETV1; ETV1; ETV5; ETV5; ETV6; FLI1; FLI1; GABPA; GABPA; GABPA; GABPB1; GABPB1; GABPB1; ZBTB7A (directAnnotation). ELF2; ELF2; ERG; ERG; ETS2; FLI1; GABPA; IKZF3; SPIC (inferredBy_Orthology).
UBR5tfdimers__MD00151CHURC1 (directAnnotation).
UBR5tfdimers__MD00391KLF4 (directAnnotation).
UBR5taipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
UBR5tfdimers__MD00441OVOL2; RELA (directAnnotation).
UBR5taipale_tf_pairs__GCM2_ELK1_NNRNGGGCGGAARTN_CAPELK1; GCM2 (directAnnotation).
UBR5metacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
UBR5metacluster_126.3LIN28B; LIN28B (directAnnotation).
UBR5transfac_pro__M01973PLAG1 (directAnnotation).
UBR5transfac_pro__M12697ZNF142 (directAnnotation).
UBR5metacluster_196.3NR1H4; NR2F6; PRDM14; ZNF264; ZNF264 (directAnnotation). HNF4A; HNF4G; NR1D1; NR1D1; NR1D1; NR1D2; NR1D2; NR1D2; NR1H2; NR1H2; NR1H2; NR1H3; NR1H3; NR1H3; NR1I2; NR1I2; NR1I2; NR2C1; NR2C2; NR2F2; NR2F6; PPARA; PPARA; PPARA; PPARD; PPARD; PPARD; PPARG; PPARG; PPARG; RARA; RARA; RARA; RARB; RARB; RARB; RORA; RORA; RORA; RORB; RORB; RORB; RORC; RORC; RORC; RXRA; RXRB; RXRG; THRA; THRA; THRA; VDR; VDR; VDR (inferredBy_Orthology).
UBR5taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
UBR5jaspar__MA0748.2YY2 (directAnnotation).
UBR5transfac_pro__M01303SP1 (directAnnotation).
UBR5kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
UBR5metacluster_3.14WT1; WT1 (directAnnotation).
UBR5metacluster_24.5ZNF675; ZNF675 (directAnnotation).
UBR5transfac_public__M00491PATZ1 (directAnnotation).
UBR5metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
UBR5transfac_pro__M07397ZNF148 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."