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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: UBE2D2

Summary for UBE2D2

Gene informationGene symbol

UBE2D2

Ensembl ID

ENSG00000131508

Entrez ID

7322

Gene nameubiquitin conjugating enzyme E2 D2
SynonymsUBC4|UbcH5B
Gene typeprotein_coding
UniProtAcc

P62837


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Dataset with differentially expressed gene: UBE2D2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.4067350.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD8+ T cells0.2828248.41e-41

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD8+ T cells0.2679915.44e-03

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.3793290.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.3227090.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-0.8579811.41e-02

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpostMalignant cells-0.3246351.76e-14

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreMalignant cells-0.3357560.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.4780620.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.5511680.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.7562370.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.4738536.71e-42

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4348940.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMalignant cells-0.2842980.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.9530750.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.7170850.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.4953630.00e+00

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Expression of UBE2D2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to UBE2D2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating UBE2D2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
UBE2D2hsa-miR-1228-3p97.5876NM_003339
UBE2D2hsa-miR-397396.8236NM_003339
UBE2D2hsa-miR-342-3p96.0509NM_003339
UBE2D2hsa-miR-19b-3p95.6879NM_003339
UBE2D2hsa-miR-19a-3p95.6879NM_003339
UBE2D2hsa-miR-518a-5p95.5651NM_003339
UBE2D2hsa-miR-52795.5651NM_003339
UBE2D2hsa-miR-4436b-5p95.4562NM_003339
UBE2D2hsa-miR-101-3p94.6193NM_003339
UBE2D2hsa-miR-4671-3p93.6756NM_003339
UBE2D2hsa-miR-467293.5558NM_003339
UBE2D2hsa-miR-3688-3p93.2311NM_003339
UBE2D2hsa-miR-454-3p93.2289NM_003339
UBE2D2hsa-miR-467493.1214NM_003339
UBE2D2hsa-miR-10400-3p93.1214NM_003339
UBE2D2hsa-miR-443793.0073NM_003339
UBE2D2hsa-miR-377-3p93.0066NM_003339
UBE2D2hsa-miR-6715a-3p92.9729NM_003339
UBE2D2hsa-miR-368492.855NM_003339
UBE2D2hsa-miR-7849-3p92.67NM_003339
UBE2D2hsa-miR-144-3p92.6138NM_003339
UBE2D2hsa-miR-211392.4697NM_003339
UBE2D2hsa-miR-130b-3p92.0912NM_003339
UBE2D2hsa-miR-429592.0912NM_003339
UBE2D2hsa-miR-130a-3p92.0912NM_003339
UBE2D2hsa-miR-301a-3p92.0912NM_003339
UBE2D2hsa-miR-366692.0912NM_003339
UBE2D2hsa-miR-301b-3p92.0912NM_003339
UBE2D2hsa-miR-130b-5p90.7863NM_003339
UBE2D2hsa-miR-509390.7384NM_003339
UBE2D2hsa-miR-364690.5539NM_003339
UBE2D2hsa-miR-445790.5287NM_003339
UBE2D2hsa-miR-1212790.3045NM_003339
UBE2D2hsa-miR-4726-3p89.462NM_003339
UBE2D2hsa-miR-427489.1011NM_003339
UBE2D2hsa-miR-4753-3p88.8983NM_003339
UBE2D2hsa-miR-433-3p88.7758NM_003339
UBE2D2hsa-miR-4474-5p88.3736NM_003339
UBE2D2hsa-miR-58787.6369NM_003339
UBE2D2hsa-miR-607787.5307NM_003339
UBE2D2hsa-miR-548ap-3p86.9081NM_003339
UBE2D2hsa-miR-548aa86.9081NM_003339
UBE2D2hsa-miR-548t-3p86.9081NM_003339
UBE2D2hsa-miR-6864-5p86.6438NM_003339
UBE2D2hsa-miR-6754-3p86.2422NM_003339
UBE2D2hsa-miR-366285.5814NM_003339
UBE2D2hsa-miR-193a-5p85.1045NM_003339
UBE2D2hsa-miR-150-3p85.004NM_003339
UBE2D2hsa-miR-6759-5p84.8401NM_003339
UBE2D2hsa-miR-4695-5p83.9464NM_003339
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Motifs and transcription factors (TFs) regulating UBE2D2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
UBE2D2metacluster_183.4ETS1 (inferredBy_Orthology).
UBE2D2transfac_pro__M05619ZSCAN5C (directAnnotation).
UBE2D2metacluster_141.4GLIS2 (directAnnotation).
UBE2D2transfac_pro__M05860ZNF548 (directAnnotation).
UBE2D2taipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
UBE2D2hocomoco__ZBT14_HUMAN.H11MO.0.CZBTB14 (directAnnotation).
UBE2D2taipale_cyt_meth__KLF3_NRCCGCAGCCCN_FL_meth_reprKLF3 (directAnnotation).
UBE2D2metacluster_45.4E2F2 (directAnnotation).
UBE2D2kznf__ZNF2_Imbeault2017_OM_RCADEZNF2 (directAnnotation).
UBE2D2hdpi__HTATIP2HTATIP2 (directAnnotation).
UBE2D2jaspar__MA1460.1YY1 (inferredBy_Orthology).
UBE2D2taipale_tf_pairs__E2F1_NHLH1_SGCGCCNNNNNNNNNNNNCAGCTGNN_CAP_reprE2F1; NHLH1 (directAnnotation).
UBE2D2transfac_pro__M01269NR4A2 (directAnnotation).
UBE2D2swissregulon__mm__E2f7E2F7 (inferredBy_Orthology).
UBE2D2hdpi__ELF2ELF2 (directAnnotation).
UBE2D2swissregulon__hs__ELK1ELK1 (directAnnotation).
UBE2D2taipale_tf_pairs__ETV5_EOMES_TNRCACCGGAWN_CAPEOMES; ETV5 (directAnnotation).
UBE2D2taipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
UBE2D2taipale_tf_pairs__ETV5_HOXA13_NNCGGAWGTNRTWAA_CAPETV5; HOXA13 (directAnnotation).
UBE2D2metacluster_161.4LHX9 (directAnnotation).
UBE2D2transfac_pro__M04748GABPA (directAnnotation).
UBE2D2kznf__ZNF441_Imbeault2017_OM_RCADEZNF441 (directAnnotation).
UBE2D2metacluster_161.3LHX9 (directAnnotation).
UBE2D2metacluster_26.9ZNF354B (directAnnotation).
UBE2D2taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_reprZNF385D (directAnnotation).
UBE2D2transfac_pro__M02089E2F3 (directAnnotation).
UBE2D2transfac_pro__M02898SMAD3 (directAnnotation).
UBE2D2metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
UBE2D2metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
UBE2D2transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
UBE2D2hdpi__HIP2UBE2K (directAnnotation).
UBE2D2hdpi__NRLNRL (directAnnotation).
UBE2D2transfac_pro__M00430E2F1 (directAnnotation).
UBE2D2homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
UBE2D2homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
UBE2D2transfac_pro__M07329SP7 (directAnnotation).
UBE2D2metacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
UBE2D2metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
UBE2D2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
UBE2D2hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
UBE2D2transfac_pro__M07436WT1 (directAnnotation).
UBE2D2transfac_pro__M01090SMAD9 (inferredBy_Orthology).
UBE2D2transfac_pro__M01837KLF11 (directAnnotation).
UBE2D2transfac_pro__M07310SP5 (directAnnotation).
UBE2D2taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
UBE2D2transfac_pro__M04817ZBTB33 (directAnnotation).
UBE2D2swissregulon__hs__KLF6KLF6 (directAnnotation).
UBE2D2kznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
UBE2D2transfac_pro__M00716ZBTB14 (directAnnotation).
UBE2D2metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
UBE2D2"(R,R)-2,3-Butanediol"

DB02418

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."