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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TMEM65

Summary for TMEM65

Gene informationGene symbol

TMEM65

Ensembl ID

ENSG00000164983

Entrez ID

157378

Gene nametransmembrane protein 65
SynonymsNA
Gene typeprotein_coding
UniProtAcc

Q6PI78


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Dataset with differentially expressed gene: TMEM65

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.278381.01e-06

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.2813520.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.315411.39e-23

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Expression of TMEM65 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TMEM65

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TMEM65

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TMEM65hsa-miR-542-3p99.3444NM_194291
TMEM65hsa-miR-656-3p99.1158NM_194291
TMEM65hsa-miR-5692a98.7674NM_194291
TMEM65hsa-miR-498-3p98.3797NM_194291
TMEM65hsa-miR-101-3p97.9979NM_194291
TMEM65hsa-miR-469897.1881NM_194291
TMEM65hsa-miR-449b-3p97.0164NM_194291
TMEM65hsa-miR-806395.719NM_194291
TMEM65hsa-miR-4714-3p95.2025NM_194291
TMEM65hsa-miR-4724-3p94.4228NM_194291
TMEM65hsa-miR-7-2-3p94.0867NM_194291
TMEM65hsa-miR-7-1-3p94.0867NM_194291
TMEM65hsa-miR-55993.8479NM_194291
TMEM65hsa-miR-397393.7514NM_194291
TMEM65hsa-miR-1213593.257NM_194291
TMEM65hsa-let-7i-5p92.3631NM_194291
TMEM65hsa-miR-450092.3631NM_194291
TMEM65hsa-let-7g-5p92.3631NM_194291
TMEM65hsa-miR-428292.2915NM_194291
TMEM65hsa-miR-548i92.111NM_194291
TMEM65hsa-miR-548bb-5p92.111NM_194291
TMEM65hsa-miR-548aq-5p92.111NM_194291
TMEM65hsa-miR-548c-5p92.111NM_194291
TMEM65hsa-miR-548d-5p92.111NM_194291
TMEM65hsa-miR-548h-5p92.111NM_194291
TMEM65hsa-miR-548ae-5p92.111NM_194291
TMEM65hsa-miR-548ar-5p92.111NM_194291
TMEM65hsa-miR-548ap-5p92.111NM_194291
TMEM65hsa-miR-548ad-5p92.111NM_194291
TMEM65hsa-miR-548w92.111NM_194291
TMEM65hsa-miR-548a-5p92.111NM_194291
TMEM65hsa-miR-548o-5p92.111NM_194291
TMEM65hsa-miR-548as-5p92.111NM_194291
TMEM65hsa-miR-548ab92.111NM_194291
TMEM65hsa-miR-548am-5p92.111NM_194291
TMEM65hsa-miR-548j-5p92.111NM_194291
TMEM65hsa-miR-548y92.111NM_194291
TMEM65hsa-miR-548ay-5p92.111NM_194291
TMEM65hsa-miR-548b-5p92.111NM_194291
TMEM65hsa-miR-548ak92.111NM_194291
TMEM65hsa-miR-548au-5p92.111NM_194291
TMEM65hsa-miR-58792.0763NM_194291
TMEM65hsa-miR-518e-5p92.0623NM_194291
TMEM65hsa-miR-518d-5p92.0623NM_194291
TMEM65hsa-miR-526a-5p92.0623NM_194291
TMEM65hsa-miR-518f-5p92.0623NM_194291
TMEM65hsa-miR-520c-5p92.0623NM_194291
TMEM65hsa-miR-522-5p92.0623NM_194291
TMEM65hsa-miR-523-5p92.0623NM_194291
TMEM65hsa-miR-519b-5p92.0623NM_194291
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Motifs and transcription factors (TFs) regulating TMEM65

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TMEM65transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
TMEM65metacluster_144.8ZNF30; ZNF30 (directAnnotation).
TMEM65cisbp__M00249WT1 (directAnnotation).
TMEM65transfac_pro__M01122ZNF219 (directAnnotation).
TMEM65dbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
TMEM65kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
TMEM65metacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
TMEM65taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
TMEM65taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TMEM65swissregulon__hs__GLIS2GLIS2 (directAnnotation).
TMEM65kznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
TMEM65homer__GGGGGGGG_MazMAZ (directAnnotation).
TMEM65taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
TMEM65taipale_tf_pairs__GCM1_ERG_RTRYGGGCGGAARKN_CAPERG; GCM1 (directAnnotation).
TMEM65kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
TMEM65metacluster_84.2RARA (directAnnotation).
TMEM65metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
TMEM65transfac_pro__M01253CNOT3 (directAnnotation).
TMEM65dbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
TMEM65metacluster_3.10KLF2; KLF4 (directAnnotation).
TMEM65jaspar__MA1721.1ZNF93 (directAnnotation).
TMEM65homer__AAGGKGRCGCAGGCA_ZNF165ZNF165 (directAnnotation).
TMEM65taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
TMEM65transfac_pro__M05479ZNF580 (directAnnotation).
TMEM65jaspar__MA1122.1TFDP1 (directAnnotation).
TMEM65taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
TMEM65taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWGNNNNNTCCGGNN_CAPGCM1; SPDEF (directAnnotation).
TMEM65metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
TMEM65metacluster_35.2EGR1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF3; ELF4; ELF4; ELK1; ELK3; ELK4; ERG; ETS1; ETS1; ETS2; ETV1; ETV1; ETV5; ETV5; ETV6; FLI1; FLI1; GABPA; GABPA; GABPA; GABPB1; GABPB1; GABPB1; ZBTB7A (directAnnotation). ELF2; ELF2; ERG; ERG; ETS2; FLI1; GABPA; IKZF3; SPIC (inferredBy_Orthology).
TMEM65tfdimers__MD00151CHURC1 (directAnnotation).
TMEM65tfdimers__MD00391KLF4 (directAnnotation).
TMEM65taipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
TMEM65tfdimers__MD00441OVOL2; RELA (directAnnotation).
TMEM65taipale_tf_pairs__GCM2_ELK1_NNRNGGGCGGAARTN_CAPELK1; GCM2 (directAnnotation).
TMEM65metacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
TMEM65metacluster_126.3LIN28B; LIN28B (directAnnotation).
TMEM65transfac_pro__M01973PLAG1 (directAnnotation).
TMEM65transfac_pro__M12697ZNF142 (directAnnotation).
TMEM65metacluster_196.3NR1H4; NR2F6; PRDM14; ZNF264; ZNF264 (directAnnotation). HNF4A; HNF4G; NR1D1; NR1D1; NR1D1; NR1D2; NR1D2; NR1D2; NR1H2; NR1H2; NR1H2; NR1H3; NR1H3; NR1H3; NR1I2; NR1I2; NR1I2; NR2C1; NR2C2; NR2F2; NR2F6; PPARA; PPARA; PPARA; PPARD; PPARD; PPARD; PPARG; PPARG; PPARG; RARA; RARA; RARA; RARB; RARB; RARB; RORA; RORA; RORA; RORB; RORB; RORB; RORC; RORC; RORC; RXRA; RXRB; RXRG; THRA; THRA; THRA; VDR; VDR; VDR (inferredBy_Orthology).
TMEM65taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TMEM65jaspar__MA0748.2YY2 (directAnnotation).
TMEM65transfac_pro__M01303SP1 (directAnnotation).
TMEM65kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
TMEM65metacluster_3.14WT1; WT1 (directAnnotation).
TMEM65metacluster_24.5ZNF675; ZNF675 (directAnnotation).
TMEM65transfac_public__M00491PATZ1 (directAnnotation).
TMEM65taipale_tf_pairs__ETV5_EOMES_RNGTGNNNNNNNNNNNNNRCRCCGGAWSN_CAPEOMES; ETV5 (directAnnotation).
TMEM65metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
TMEM65transfac_pro__M07397ZNF148 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."