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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SENP6

Summary for SENP6

Gene informationGene symbol

SENP6

Ensembl ID

ENSG00000112701

Entrez ID

26054

Gene nameSUMO specific peptidase 6
SynonymsKIAA0797|SUSP1
Gene typeprotein_coding
UniProtAcc

Q9GZR1


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Dataset with differentially expressed gene: SENP6

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.2827060.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.2765660.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.2629750.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.2798830.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.265658.08e-14

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Expression of SENP6 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SENP6

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SENP6

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SENP6hsa-miR-5692a99.445NM_001100409
SENP6hsa-miR-664b-3p97.3273NM_001100409
SENP6hsa-miR-579-3p97.3273NM_001100409
SENP6hsa-miR-153-5p94.8602NM_001100409
SENP6hsa-miR-5010-3p94.7733NM_001100409
SENP6hsa-miR-427693.9305NM_001100409
SENP6hsa-miR-6719-3p93.6464NM_001100409
SENP6hsa-miR-6878-3p93.5059NM_001100409
SENP6hsa-miR-3682-3p92.1582NM_001100409
SENP6hsa-miR-7-1-3p90.8976NM_001100409
SENP6hsa-miR-7-2-3p90.8976NM_001100409
SENP6hsa-miR-127590.7855NM_001100409
SENP6hsa-miR-4665-5p90.7855NM_001100409
SENP6hsa-miR-186-5p90.4807NM_001100409
SENP6hsa-miR-467289.7858NM_001100409
SENP6hsa-miR-477389.3689NM_001100409
SENP6hsa-miR-3059-5p89.0632NM_001100409
SENP6hsa-miR-425-5p88.9482NM_001100409
SENP6hsa-miR-4691-5p88.7461NM_001100409
SENP6hsa-miR-6792-3p88.7461NM_001100409
SENP6hsa-miR-6749-3p88.7461NM_001100409
SENP6hsa-miR-568887.7453NM_001100409
SENP6hsa-miR-568087.5161NM_001100409
SENP6hsa-miR-556-3p87.0889NM_001100409
SENP6hsa-miR-137-3p86.922NM_001100409
SENP6hsa-miR-495-3p86.2043NM_001100409
SENP6hsa-miR-655-3p85.8235NM_001100409
SENP6hsa-miR-374c-5p85.8235NM_001100409
SENP6hsa-miR-548aa85.3506NM_001100409
SENP6hsa-miR-548ap-3p85.3506NM_001100409
SENP6hsa-miR-548t-3p85.3506NM_001100409
SENP6hsa-miR-427784.9388NM_001100409
SENP6hsa-miR-806784.1736NM_001304792
SENP6hsa-miR-6508-5p84.1736NM_001304792
SENP6hsa-miR-337-3p84.1723NM_001100409
SENP6hsa-miR-340-5p83.6723NM_001100409
SENP6hsa-miR-190a-3p83.3969NM_001100409
SENP6hsa-miR-432883.305NM_001100409
SENP6hsa-miR-23a-3p82.6478NM_001100409
SENP6hsa-miR-23c82.6478NM_001100409
SENP6hsa-miR-23b-3p82.6478NM_001100409
SENP6hsa-miR-1266-3p82.2237NM_001100409
SENP6hsa-miR-625-5p82.0559NM_001100409
SENP6hsa-miR-474482.0099NM_001100409
SENP6hsa-miR-569681.982NM_001100409
SENP6hsa-miR-670-3p81.4776NM_001100409
SENP6hsa-miR-472980.9187NM_001100409
SENP6hsa-miR-335-3p80.259NM_001100409
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Motifs and transcription factors (TFs) regulating SENP6

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SENP6transfac_pro__M12697ZNF142 (directAnnotation).
SENP6transfac_pro__M00716ZBTB14 (directAnnotation).
SENP6taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
SENP6transfac_pro__M01090SMAD9 (inferredBy_Orthology).
SENP6transfac_pro__M04893TAF1 (directAnnotation).
SENP6transfac_pro__M01253CNOT3 (directAnnotation).
SENP6jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
SENP6transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
SENP6transfac_pro__M04916TAF1 (directAnnotation).
SENP6hdpi__RARARARA (directAnnotation).
SENP6jaspar__MA1650.1ZBTB14 (directAnnotation).
SENP6taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
SENP6dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
SENP6cisbp__M08228PAX5 (directAnnotation).
SENP6transfac_pro__M01088DEAF1 (inferredBy_Orthology).
SENP6transfac_pro__M00938E2F1 (directAnnotation).
SENP6kznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
SENP6metacluster_24.1HIC1; HIC1; ZNF816; ZNF816; ZNF816; ZXDC (directAnnotation).
SENP6transfac_pro__M00800TFAP2A; TFAP2B; TFAP2C (directAnnotation).
SENP6kznf__ZNF267_Imbeault2017_RP_RCADEZNF267 (directAnnotation).
SENP6metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
SENP6metacluster_24.3DIDO1; HINFP; ILF3; ZBTB21; ZFX; ZFX; ZNF283; ZNF37A; ZNF501; ZNF614 (directAnnotation). ZFY; ZFY (inferredBy_Orthology).
SENP6taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
SENP6metacluster_126.7CTCF; ZFY; ZSCAN30 (directAnnotation).
SENP6transfac_pro__M03846SMAD5 (directAnnotation).
SENP6metacluster_45.4E2F2 (directAnnotation).
SENP6taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
SENP6metacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
SENP6cisbp__M00343PAX6 (directAnnotation).
SENP6taipale_tf_pairs__ETV5_HES7_CCGGAANNNNNNCACGTG_CAPETV5; HES7 (directAnnotation).
SENP6taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
SENP6transfac_pro__M12694ZFP14 (directAnnotation).
SENP6metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
SENP6metacluster_115.1NEUROD1; PHF1; ZBTB20; ZNF17; ZNF296; ZNF350; ZNF486; ZNF574; ZNF589; ZNF891 (directAnnotation). IRF4; IRF6; PRDM5 (inferredBy_Orthology).
SENP6kznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
SENP6swissregulon__hs__CHD1CHD1 (directAnnotation).
SENP6swissregulon__hs__KLF6KLF6 (directAnnotation).
SENP6transfac_pro__M02898SMAD3 (directAnnotation).
SENP6transfac_pro__M07387ZBTB7A (directAnnotation).
SENP6kznf__ZNF2_Imbeault2017_RP_ChIP-seqZNF2 (directAnnotation).
SENP6cisbp__M00775ZBTB1 (inferredBy_Orthology).
SENP6hdpi__TIMELESSTIMELESS (directAnnotation).
SENP6transfac_pro__M09837ZNF449 (directAnnotation).
SENP6transfac_pro__M00430E2F1 (directAnnotation).
SENP6kznf__ZNF311_Imbeault2017_RP_ChIP-seqZNF311 (directAnnotation).
SENP6tfdimers__MD00364WT1 (directAnnotation).
SENP6hdpi__GTF3C2GTF3C2 (directAnnotation).
SENP6jaspar__MA1721.1ZNF93 (directAnnotation).
SENP6transfac_pro__M08005TCFL5 (inferredBy_Orthology).
SENP6kznf__ZNF548_Imbeault2017_OM_RCADEZNF548 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."