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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RNF24

Summary for RNF24

Gene informationGene symbol

RNF24

Ensembl ID

ENSG00000101236

Entrez ID

11237

Gene namering finger protein 24
SynonymsG1L
Gene typeprotein_coding
UniProtAcc

Q9Y225


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Dataset with differentially expressed gene: RNF24

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.624221.12e-05

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.2817790.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3639713.08e-36

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Expression of RNF24 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RNF24

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RNF24

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RNF24hsa-miR-4728-5p98.1627NM_001134337
RNF24hsa-miR-6785-5p96.6028NM_001134337
RNF24hsa-miR-6883-5p94.848NM_001134337
RNF24hsa-miR-149-3p94.848NM_001134337
RNF24hsa-let-7a-3p94.4006NM_001134337
RNF24hsa-let-7b-3p94.4006NM_001134337
RNF24hsa-miR-98-3p94.4006NM_001134337
RNF24hsa-let-7f-1-3p94.4006NM_001134337
RNF24hsa-miR-607193.2532NM_001321749
RNF24hsa-miR-4766-3p92.9521NM_001134337
RNF24hsa-miR-4703-5p91.0518NM_001321749
RNF24hsa-miR-6508-5p90.7851NM_001134337
RNF24hsa-miR-937-5p90.558NM_001321749
RNF24hsa-miR-2467-5p89.78NM_001321749
RNF24hsa-miR-660-3p88.5063NM_001321749
RNF24hsa-miR-3613-3p87.8302NM_001134337
RNF24hsa-miR-806787.4586NM_001134337
RNF24hsa-miR-548p86.0689NM_001134337
RNF24hsa-miR-808185.0455NM_001321749
RNF24hsa-miR-4764-5p84.9926NM_001321749
RNF24hsa-miR-427584.9373NM_001134337
RNF24hsa-miR-444184.3745NM_001321749
RNF24hsa-miR-3942-5p84.0555NM_001321749
RNF24hsa-miR-390883.582NM_001321749
RNF24hsa-miR-1273h-5p83.1211NM_001134337
RNF24hsa-miR-1285-3p81.9556NM_001321749
RNF24hsa-miR-6513-5p81.9037NM_001321749
RNF24hsa-miR-323b-5p81.7281NM_001321749
RNF24hsa-miR-410-5p81.7281NM_001321749
RNF24hsa-miR-494-5p81.7281NM_001321749
RNF24hsa-miR-66581.2904NM_001321749
RNF24hsa-miR-428281.2847NM_001321749
RNF24hsa-miR-397580.8779NM_001321749
RNF24hsa-miR-425180.6385NM_001321749
RNF24hsa-miR-6780a-5p80.1446NM_001134337
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Motifs and transcription factors (TFs) regulating RNF24

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RNF24transfac_pro__M03876ZBTB33 (directAnnotation).
RNF24metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
RNF24kznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
RNF24metacluster_135.11NR2C2 (directAnnotation).
RNF24metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
RNF24metacluster_144.3ZNF704; ZNF704 (directAnnotation).
RNF24cisbp__M00968MTF2 (directAnnotation).
RNF24metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
RNF24metacluster_160.20JUND; PRDM15 (directAnnotation).
RNF24cisbp__M00341PAX6 (directAnnotation).
RNF24metacluster_198.3ZFP64 (directAnnotation).
RNF24metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
RNF24jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
RNF24metacluster_61.1DEAF1; DEAF1 (directAnnotation).
RNF24cisbp__M00788ZFY (inferredBy_Orthology).
RNF24kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
RNF24metacluster_175.1ZNF283 (directAnnotation).
RNF24hdpi__ZNF304ZNF304 (directAnnotation).
RNF24transfac_pro__M02844BCL6B (inferredBy_Orthology).
RNF24metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
RNF24transfac_pro__M01199TRIM28 (directAnnotation).
RNF24kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
RNF24metacluster_151.2ZNF23 (directAnnotation).
RNF24transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
RNF24transfac_pro__M03806ZBTB7C (directAnnotation).
RNF24transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."