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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RBPJ

Summary for RBPJ

Gene informationGene symbol

RBPJ

Ensembl ID

ENSG00000168214

Entrez ID

3516

Gene namerecombination signal binding protein for immunoglobulin kappa J region
SynonymsCBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: RBPJ

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.2527090.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.2688982.00e-35

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro0.2738172.26e-15

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.3155592.52e-04

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells0.4731010.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD4+ T cells0.4977352.85e-13

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells0.9756130.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells-0.5062132.54e-24

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.4978980.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.9412260.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.4493130.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.4617850.00e+00

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Expression of RBPJ in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RBPJ

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

RBPJ

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating RBPJ

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RBPJhsa-miR-548x-3p99.7353NM_005349
RBPJhsa-miR-548aj-3p99.7353NM_005349
RBPJhsa-miR-548am-3p99.7091NM_005349
RBPJhsa-miR-548ah-3p99.7091NM_005349
RBPJhsa-miR-6720-5p99.6457NM_005349
RBPJhsa-miR-6512-3p99.6457NM_005349
RBPJhsa-miR-548j-3p99.6223NM_005349
RBPJhsa-miR-548ae-3p99.6223NM_005349
RBPJhsa-miR-548aq-3p99.6223NM_005349
RBPJhsa-miR-570-3p98.8359NM_203283
RBPJhsa-miR-9-3p98.8254NM_005349
RBPJhsa-miR-128398.6084NM_005349
RBPJhsa-miR-446898.0084NM_005349
RBPJhsa-miR-394197.8896NM_203283
RBPJhsa-miR-3140-3p97.3496NM_005349
RBPJhsa-miR-6835-3p97.2429NM_005349
RBPJhsa-miR-21-5p97.1701NM_005349
RBPJhsa-miR-4666b96.715NM_203283
RBPJhsa-miR-590-5p96.6698NM_005349
RBPJhsa-miR-6739-3p96.1116NM_005349
RBPJhsa-miR-46695.9635NM_203283
RBPJhsa-miR-6849-3p95.7955NM_005349
RBPJhsa-miR-467295.1729NM_203283
RBPJhsa-miR-6853-3p94.8897NM_005349
RBPJhsa-miR-806894.7618NM_005349
RBPJhsa-miR-568894.6661NM_203283
RBPJhsa-miR-495-3p94.2849NM_203283
RBPJhsa-miR-1213694.2608NM_203283
RBPJhsa-miR-4668-5p93.9962NM_203283
RBPJhsa-miR-808793.9388NM_005349
RBPJhsa-miR-6740-3p93.6561NM_005349
RBPJhsa-miR-431893.5882NM_005349
RBPJhsa-miR-548h-3p93.5813NM_203283
RBPJhsa-miR-548d-3p93.5813NM_203283
RBPJhsa-miR-548z93.5813NM_203283
RBPJhsa-miR-548ac93.5813NM_203283
RBPJhsa-miR-548bb-3p93.5813NM_203283
RBPJhsa-miR-6722-5p93.3905NM_005349
RBPJhsa-miR-15a-5p93.3052NM_005349
RBPJhsa-miR-15b-5p93.3052NM_005349
RBPJhsa-miR-424-5p93.3052NM_005349
RBPJhsa-miR-16-5p93.3052NM_005349
RBPJhsa-miR-497-5p93.3052NM_005349
RBPJhsa-miR-6838-5p93.3052NM_005349
RBPJhsa-miR-195-5p93.3052NM_005349
RBPJhsa-miR-375-3p93.0837NM_005349
RBPJhsa-miR-6811-5p93.0578NM_005349
RBPJhsa-miR-6511b-5p93.0578NM_005349
RBPJhsa-miR-63692.9462NM_005349
RBPJhsa-miR-392692.5749NM_005349
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Motifs and transcription factors (TFs) regulating RBPJ

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RBPJkznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
RBPJtransfac_pro__M01253CNOT3 (directAnnotation).
RBPJmetacluster_159.5ZIC1; ZIC4; ZNF423 (directAnnotation). SP1 (inferredBy_Orthology).
RBPJcisbp__M00968MTF2 (directAnnotation).
RBPJtfdimers__MD00038TFAP2C (directAnnotation).
RBPJtaipale_tf_pairs__E2F3_TBX21_NGGTGTGNNGGCGCSN_CAP_reprE2F3; TBX21 (directAnnotation).
RBPJmetacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
RBPJtransfac_pro__M01199TRIM28 (directAnnotation).
RBPJmetacluster_115.1NEUROD1; PHF1; ZBTB20; ZNF17; ZNF296; ZNF350; ZNF486; ZNF574; ZNF589; ZNF891 (directAnnotation). IRF4; IRF6; PRDM5 (inferredBy_Orthology).
RBPJmetacluster_3.14WT1; WT1 (directAnnotation).
RBPJtransfac_pro__M12697ZNF142 (directAnnotation).
RBPJmetacluster_84.2RARA (directAnnotation).
RBPJtransfac_pro__M01122ZNF219 (directAnnotation).
RBPJtransfac_pro__M07387ZBTB7A (directAnnotation).
RBPJmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
RBPJtransfac_pro__M04893TAF1 (directAnnotation).
RBPJkznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
RBPJtfdimers__MD00154MZF1; SREBF1 (directAnnotation).
RBPJkznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
RBPJkznf__EGR2_Barrera2016.3_PBMEGR2 (directAnnotation).
RBPJmetacluster_23.8GLIS1; GLIS1; GLIS1; GLIS2; GLIS2; GLIS2; GLIS2 (directAnnotation). GLIS2; GLIS3; ZXDA; ZXDB; ZXDC (inferredBy_Orthology).
RBPJtransfac_pro__M00986CHURC1 (directAnnotation).
RBPJmetacluster_182.2GCM1; GCM1; GCM1; GCM1; GCM2; GCM2 (directAnnotation). GCM1; GCM1; GCM1; GCM1; GCM2; GCM2 (inferredBy_Orthology).
RBPJmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
RBPJtransfac_pro__M02786PLAGL1 (inferredBy_Orthology).
RBPJtaipale_tf_pairs__E2F3_TBX21_NGGTGTGNNGGCGCSNNNNCRMN_CAPE2F3; TBX21 (directAnnotation).
RBPJmetacluster_66.4ARNT2; NR0B1; NR0B1; ZSCAN5A; ZSCAN5A (directAnnotation). ARNT2 (inferredBy_Orthology).
RBPJcisbp__M00249WT1 (directAnnotation).
RBPJmetacluster_24.1HIC1; HIC1; ZNF816; ZNF816; ZNF816; ZXDC (directAnnotation).
RBPJtaipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
RBPJtransfac_public__M00373PAX4 (directAnnotation).
RBPJtransfac_pro__M01714KLF15 (directAnnotation).
RBPJdbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
RBPJcisbp__M00135ZBTB7B (inferredBy_Orthology).
RBPJtfdimers__MD00366MTF1; OVOL2 (directAnnotation).
RBPJtransfac_pro__M00938E2F1 (directAnnotation).
RBPJtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
RBPJtransfac_pro__M12667GPBP1L1 (directAnnotation).
RBPJmetacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
RBPJtransfac_pro__M07310SP5 (directAnnotation).
RBPJcisbp__M00341PAX6 (directAnnotation).
RBPJswissregulon__hs__PATZ1PATZ1 (directAnnotation).
RBPJmetacluster_159.3ARID3A; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCF; CTCFL; CTCFL; CTCFL; CTCFL; CTCFL; CTCFL; CTCFL; CTCFL; HMGXB4; KLF16; MBD1; RAD21; RAD21; RAD21; RXRA; SMC3; SMC3; ZNF576; ZNF654; ZNF764 (directAnnotation). CTCF; CTCF; CTCF; CTCF; CTCFL (inferredBy_Orthology).
RBPJtransfac_pro__M08818KLF8 (directAnnotation).
RBPJkznf__ZNF311_Imbeault2017_RP_ChIP-seqZNF311 (directAnnotation).
RBPJkznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
RBPJmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
RBPJkznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
RBPJkznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
RBPJjaspar__MA1721.1ZNF93 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."