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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RAP2B

Summary for RAP2B

Gene informationGene symbol

RAP2B

Ensembl ID

ENSG00000181467

Entrez ID

5912

Gene nameRAP2B, member of RAS oncogene family
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P61225


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Dataset with differentially expressed gene: RAP2B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.2559340.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.3760651.43e-12

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.3989772.79e-20

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.9147133.82e-20

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.451660.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.3449710.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.694150.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6755650.00e+00

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Expression of RAP2B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RAP2B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RAP2B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RAP2Bhsa-miR-499a-3p95.3407NM_002886
RAP2Bhsa-miR-499b-3p95.3407NM_002886
RAP2Bhsa-miR-366294.7004NM_002886
RAP2Bhsa-miR-519d-5p93.3534NM_002886
RAP2Bhsa-miR-302b-5p93.151NM_002886
RAP2Bhsa-miR-302d-5p93.151NM_002886
RAP2Bhsa-miR-5582-3p91.6898NM_002886
RAP2Bhsa-miR-848591.2419NM_002886
RAP2Bhsa-miR-428291.0481NM_002886
RAP2Bhsa-miR-515-5p90.6746NM_002886
RAP2Bhsa-miR-7856-5p90.038NM_002886
RAP2Bhsa-miR-464289.7713NM_002886
RAP2Bhsa-miR-519e-5p89.4723NM_002886
RAP2Bhsa-miR-3613-3p87.9197NM_002886
RAP2Bhsa-miR-3692-3p87.6794NM_002886
RAP2Bhsa-miR-568087.1104NM_002886
RAP2Bhsa-miR-6791-3p86.6163NM_002886
RAP2Bhsa-miR-6829-3p86.6163NM_002886
RAP2Bhsa-miR-513a-5p86.2463NM_002886
RAP2Bhsa-miR-23b-3p85.6653NM_002886
RAP2Bhsa-miR-23a-3p85.6653NM_002886
RAP2Bhsa-miR-23c85.6653NM_002886
RAP2Bhsa-miR-330-3p85.4201NM_002886
RAP2Bhsa-miR-138-2-3p83.2679NM_002886
RAP2Bhsa-miR-364682.6914NM_002886
RAP2Bhsa-miR-391082.097NM_002886
RAP2Bhsa-miR-4760-3p81.5974NM_002886
RAP2Bhsa-miR-3121-3p81.273NM_002886
RAP2Bhsa-miR-7158-5p80.8326NM_002886
RAP2Bhsa-miR-126480.6288NM_002886
RAP2Bhsa-miR-6881-3p80.1994NM_002886
RAP2Bhsa-miR-365880.0711NM_002886
RAP2Bhsa-miR-205-5p80.0094NM_002886
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Motifs and transcription factors (TFs) regulating RAP2B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RAP2Btransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
RAP2Btransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
RAP2Btransfac_pro__M03806ZBTB7C (directAnnotation).
RAP2Btransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
RAP2Bkznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
RAP2Bmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
RAP2Bkznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
RAP2Bkznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
RAP2Bjaspar__MA1721.1ZNF93 (directAnnotation).
RAP2Bkznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
RAP2Bdbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
RAP2Bdbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
RAP2Btaipale_tf_pairs__ETV5_HES7_CCGGAANNNNNNCACGTG_CAPETV5; HES7 (directAnnotation).
RAP2Bflyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
RAP2Bdbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
RAP2Bmetacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
RAP2Btaipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
RAP2Bkznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
RAP2Bswissregulon__hs__CHD1CHD1 (directAnnotation).
RAP2Bidmmpmm__MadSMAD9 (inferredBy_Orthology).
RAP2Bkznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
RAP2Btransfac_pro__M01090SMAD9 (inferredBy_Orthology).
RAP2Bkznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
RAP2Bkznf__ZNF311_Imbeault2017_OM_MEMEZNF311 (directAnnotation).
RAP2Btransfac_pro__M07310SP5 (directAnnotation).
RAP2Btaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
RAP2Btransfac_pro__M00938E2F1 (directAnnotation).
RAP2Btransfac_pro__M04893TAF1 (directAnnotation).
RAP2Btransfac_pro__M04817ZBTB33 (directAnnotation).
RAP2Btransfac_pro__M01088DEAF1 (inferredBy_Orthology).
RAP2Btransfac_pro__M12697ZNF142 (directAnnotation).
RAP2Btfdimers__MD00364WT1 (directAnnotation).
RAP2Bmetacluster_126.3LIN28B; LIN28B (directAnnotation).
RAP2Bmetacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
RAP2Btfdimers__MD00483ZBTB14 (directAnnotation).
RAP2Btransfac_pro__M01303SP1 (directAnnotation).
RAP2Btransfac_pro__M02861GATA6 (inferredBy_Orthology).
RAP2Btfdimers__MD00552USF2; ZBTB14 (directAnnotation).
RAP2Bhocomoco__XBP1_HUMAN.H11MO.0.DXBP1 (directAnnotation).
RAP2Btransfac_pro__M07387ZBTB7A (directAnnotation).
RAP2Btaipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
RAP2Bmetacluster_144.13HIC1; HIC1 (directAnnotation).
RAP2Btransfac_pro__M00665SP3 (directAnnotation).
RAP2Btransfac_pro__M02898SMAD3 (directAnnotation).
RAP2Bkznf__ZNF548_Imbeault2017_OM_RCADEZNF548 (directAnnotation).
RAP2Bmetacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
RAP2Bhocomoco__ZFP57_MOUSE.H11MO.0.BZFP57 (inferredBy_Orthology).
RAP2Btaipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
RAP2Btransfac_pro__M07329SP7 (directAnnotation).
RAP2Btaipale_tf_pairs__ETV5_TCF3_RNCGGAAGNNNNNCASSTGN_CAP_reprETV5; TCF3 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."