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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PUM1

Summary for PUM1

Gene informationGene symbol

PUM1

Ensembl ID

ENSG00000134644

Entrez ID

9698

Gene namepumilio RNA binding family member 1
SynonymsKIAA0099|PUMH1
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PUM1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.4957190.00e+00

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells0.3299621.22e-41

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.4145090.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.2692510.00e+00

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Expression of PUM1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PUM1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PUM1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PUM1hsa-miR-5011-5p100NM_001020658
PUM1hsa-miR-190a-3p100NM_001020658
PUM1hsa-miR-4789-5p99.9645NM_001020658
PUM1hsa-let-7c-3p99.4222NM_001020658
PUM1hsa-miR-323a-3p99.3958NM_001020658
PUM1hsa-miR-548aw99.008NM_001020658
PUM1hsa-miR-480197.8948NM_001020658
PUM1hsa-miR-1468-3p96.9121NM_001020658
PUM1hsa-miR-4731-3p96.9006NM_001020658
PUM1hsa-miR-205396.1276NM_001020658
PUM1hsa-miR-511-3p95.6322NM_001020658
PUM1hsa-miR-4704-5p94.8554NM_001020658
PUM1hsa-miR-548x-5p94.8428NM_001020658
PUM1hsa-miR-548aj-5p94.8428NM_001020658
PUM1hsa-miR-548g-5p94.8428NM_001020658
PUM1hsa-miR-548f-5p94.8428NM_001020658
PUM1hsa-miR-7849-3p94.8353NM_001020658
PUM1hsa-miR-318294.178NM_001020658
PUM1hsa-miR-6768-5p94.0175NM_001020658
PUM1hsa-let-7b-3p93.5081NM_001020658
PUM1hsa-let-7a-3p93.5081NM_001020658
PUM1hsa-let-7f-1-3p93.5081NM_001020658
PUM1hsa-miR-98-3p93.5081NM_001020658
PUM1hsa-miR-3529-3p93.5043NM_001020658
PUM1hsa-miR-613293.402NM_001020658
PUM1hsa-miR-6836-5p93.402NM_001020658
PUM1hsa-miR-313393.1189NM_001020658
PUM1hsa-miR-519d-5p92.546NM_001020658
PUM1hsa-miR-4742-3p92.296NM_001020658
PUM1hsa-miR-524-5p92.2567NM_001020658
PUM1hsa-miR-520d-5p92.2567NM_001020658
PUM1hsa-miR-3613-3p91.9749NM_001020658
PUM1hsa-miR-432791.8269NM_001020658
PUM1hsa-miR-509391.6786NM_001020658
PUM1hsa-miR-340-5p91.2642NM_001020658
PUM1hsa-miR-651-5p91.0423NM_001020658
PUM1hsa-miR-10397-3p90.7507NM_001020658
PUM1hsa-miR-6841-5p90.5277NM_001020658
PUM1hsa-miR-4645-3p90.2691NM_001020658
PUM1hsa-miR-345-3p89.2395NM_001020658
PUM1hsa-miR-315988.1174NM_001020658
PUM1hsa-miR-186-5p87.6971NM_001020658
PUM1hsa-miR-205486.9345NM_001020658
PUM1hsa-miR-3692-3p86.6668NM_001020658
PUM1hsa-miR-806886.09NM_001020658
PUM1hsa-miR-29b-1-5p85.633NM_001020658
PUM1hsa-miR-34b-5p84.6317NM_001020658
PUM1hsa-miR-449c-5p84.6317NM_001020658
PUM1hsa-miR-145-3p84.5258NM_001020658
PUM1hsa-miR-4666a-5p84.3817NM_001020658
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Motifs and transcription factors (TFs) regulating PUM1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PUM1swissregulon__hs__CHD1CHD1 (directAnnotation).
PUM1idmmpmm__MadSMAD9 (inferredBy_Orthology).
PUM1kznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
PUM1transfac_pro__M01090SMAD9 (inferredBy_Orthology).
PUM1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
PUM1kznf__ZNF311_Imbeault2017_OM_MEMEZNF311 (directAnnotation).
PUM1transfac_pro__M07310SP5 (directAnnotation).
PUM1jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
PUM1transfac_pro__M00938E2F1 (directAnnotation).
PUM1transfac_pro__M04893TAF1 (directAnnotation).
PUM1transfac_pro__M04817ZBTB33 (directAnnotation).
PUM1transfac_pro__M01088DEAF1 (inferredBy_Orthology).
PUM1transfac_pro__M12697ZNF142 (directAnnotation).
PUM1metacluster_175.1ZNF283 (directAnnotation).
PUM1cisbp__M00788ZFY (inferredBy_Orthology).
PUM1tfdimers__MD00364WT1 (directAnnotation).
PUM1metacluster_126.3LIN28B; LIN28B (directAnnotation).
PUM1hdpi__ZNF304ZNF304 (directAnnotation).
PUM1metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
PUM1metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
PUM1transfac_pro__M04916TAF1 (directAnnotation).
PUM1metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
PUM1tfdimers__MD00483ZBTB14 (directAnnotation).
PUM1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
PUM1transfac_pro__M02861GATA6 (inferredBy_Orthology).
PUM1transfac_pro__M07387ZBTB7A (directAnnotation).
PUM1taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
PUM1metacluster_144.13HIC1; HIC1 (directAnnotation).
PUM1transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PUM1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
PUM1transfac_pro__M02898SMAD3 (directAnnotation).
PUM1kznf__ZNF548_Imbeault2017_OM_RCADEZNF548 (directAnnotation).
PUM1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
PUM1kznf__ZNF2_Imbeault2017_OM_RCADEZNF2 (directAnnotation).
PUM1taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
PUM1transfac_pro__M07329SP7 (directAnnotation).
PUM1taipale_tf_pairs__ETV5_TCF3_RNCGGAAGNNNNNCASSTGN_CAP_reprETV5; TCF3 (directAnnotation).
PUM1taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
PUM1metacluster_126.4ZNF12; ZNF12; ZNF44; ZNF563; ZNF93 (directAnnotation).
PUM1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
PUM1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
PUM1metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
PUM1jaspar__MA1122.1TFDP1 (directAnnotation).
PUM1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
PUM1tfdimers__MD00151CHURC1 (directAnnotation).
PUM1tfdimers__MD00391KLF4 (directAnnotation).
PUM1metacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
PUM1metacluster_3.14WT1; WT1 (directAnnotation).
PUM1metacluster_24.5ZNF675; ZNF675 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."