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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: PRKAR1A

Summary for PRKAR1A

Gene informationGene symbol

PRKAR1A

Ensembl ID

ENSG00000108946

Entrez ID

5573

Gene nameprotein kinase cAMP-dependent type I regulatory subunit alpha
SynonymsCNC1|PRKAR1|TSE1
Gene typeprotein_coding
UniProtAcc

P10644


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Dataset with differentially expressed gene: PRKAR1A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.4305920.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.2619538.36e-06

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.4989483.05e-07

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.3418311.12e-11

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3341270.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4703660.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6308620.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.5754980.00e+00

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Expression of PRKAR1A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PRKAR1A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PRKAR1A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PRKAR1Ahsa-miR-548x-3p96.1345NM_001276289
PRKAR1Ahsa-miR-548aj-3p96.1345NM_001276289
PRKAR1Ahsa-miR-494-3p96.0645NM_001276290
PRKAR1Ahsa-miR-4701-5p95.4981NM_001276289
PRKAR1Ahsa-miR-58895.4981NM_001276289
PRKAR1Ahsa-miR-442295.3497NM_001276289
PRKAR1Ahsa-miR-548ah-3p95.025NM_001276289
PRKAR1Ahsa-miR-548ae-3p95.025NM_001276289
PRKAR1Ahsa-miR-548aq-3p95.025NM_001276289
PRKAR1Ahsa-miR-548am-3p95.025NM_001276289
PRKAR1Ahsa-miR-548j-3p95.025NM_001276289
PRKAR1Ahsa-miR-365894.6504NM_001276289
PRKAR1Ahsa-miR-6830-3p93.7485NM_001276289
PRKAR1Ahsa-miR-96-5p92.1006NM_001276289
PRKAR1Ahsa-miR-5011-5p91.223NM_001276289
PRKAR1Ahsa-miR-3120-3p91.1491NM_001276289
PRKAR1Ahsa-miR-1271-5p90.9221NM_001276289
PRKAR1Ahsa-miR-1213390.9221NM_001276289
PRKAR1Ahsa-miR-6505-5p90.7754NM_001276289
PRKAR1Ahsa-miR-6508-5p90.4865NM_001276289
PRKAR1Ahsa-miR-190a-3p89.9013NM_001276289
PRKAR1Ahsa-miR-875-3p89.6854NM_001276289
PRKAR1Ahsa-miR-1468-3p89.3392NM_001276289
PRKAR1Ahsa-miR-519d-5p89.1106NM_001276289
PRKAR1Ahsa-miR-653-3p88.3985NM_001276289
PRKAR1Ahsa-miR-568887.8988NM_001276289
PRKAR1Ahsa-miR-548e-5p87.7646NM_001276289
PRKAR1Ahsa-miR-5584-5p87.7108NM_001276289
PRKAR1Ahsa-miR-7-1-3p87.6949NM_001276289
PRKAR1Ahsa-miR-7-2-3p87.6949NM_001276289
PRKAR1Ahsa-miR-495-3p87.6949NM_001276289
PRKAR1Ahsa-miR-569687.6439NM_001276289
PRKAR1Ahsa-miR-9-3p87.2474NM_001276289
PRKAR1Ahsa-miR-7844-5p86.739NM_001276289
PRKAR1Ahsa-miR-4482-3p86.5582NM_001276289
PRKAR1Ahsa-miR-6835-3p86.4537NM_001276289
PRKAR1Ahsa-miR-483-3p86.3157NM_001276289
PRKAR1Ahsa-miR-514a-5p85.4887NM_001276289
PRKAR1Ahsa-miR-314885.1074NM_001276289
PRKAR1Ahsa-miR-443284.8567NM_001276289
PRKAR1Ahsa-miR-499a-5p84.7177NM_001276289
PRKAR1Ahsa-miR-561-3p84.4107NM_001276289
PRKAR1Ahsa-miR-518c-5p84.3892NM_001276289
PRKAR1Ahsa-miR-150-5p84.3508NM_001276289
PRKAR1Ahsa-miR-548az-3p83.2766NM_001276289
PRKAR1Ahsa-miR-548p83.1905NM_001276289
PRKAR1Ahsa-miR-7159-3p82.8012NM_001276289
PRKAR1Ahsa-miR-125682.0548NM_001276289
PRKAR1Ahsa-miR-585-5p81.6503NM_001276289
PRKAR1Ahsa-miR-1236-5p81.1425NM_001276290
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Motifs and transcription factors (TFs) regulating PRKAR1A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PRKAR1Akznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PRKAR1Ametacluster_3.3KLF10; KLF15; KLF16; KLF9; SP1 (directAnnotation).
PRKAR1Atransfac_pro__M02898SMAD3 (directAnnotation).
PRKAR1Atransfac_public__M00491PATZ1 (directAnnotation).
PRKAR1Atransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
PRKAR1Ametacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
PRKAR1Akznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
PRKAR1Ataipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2ELK1; GCM1 (directAnnotation).
PRKAR1Ametacluster_135.11NR2C2 (directAnnotation).
PRKAR1Acisbp__M00968MTF2 (directAnnotation).
PRKAR1Acisbp__M00341PAX6 (directAnnotation).
PRKAR1Ametacluster_198.3ZFP64 (directAnnotation).
PRKAR1Ametacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PRKAR1Ametacluster_61.1DEAF1; DEAF1 (directAnnotation).
PRKAR1Acisbp__M00788ZFY (inferredBy_Orthology).
PRKAR1Akznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
PRKAR1Ametacluster_175.1ZNF283 (directAnnotation).
PRKAR1Ahdpi__ZNF304ZNF304 (directAnnotation).
PRKAR1Atransfac_pro__M02844BCL6B (inferredBy_Orthology).
PRKAR1Ametacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
PRKAR1Ametacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PRKAR1Atransfac_pro__M01199TRIM28 (directAnnotation).
PRKAR1Akznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
PRKAR1Atransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PRKAR1Atransfac_pro__M03806ZBTB7C (directAnnotation).
PRKAR1Atransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PRKAR1Atransfac_pro__M06404ZNF497 (directAnnotation).
PRKAR1Atfdimers__MD00047NR3C1; PGR; ZFP42 (directAnnotation).
PRKAR1Ajaspar__MA1105.2GRHL2 (directAnnotation).
PRKAR1Atfdimers__MD00032GFI1; GFI1B; NKX3-2 (directAnnotation).
PRKAR1Ahocomoco__KAISO_HUMAN.H11MO.2.AZBTB33 (directAnnotation).
PRKAR1Ataipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
PRKAR1Ametacluster_155.28ZFP64 (directAnnotation). ZFP64 (inferredBy_Orthology).
PRKAR1Atfdimers__MD00557MZF1 (directAnnotation).
PRKAR1Atfdimers__MD00376HOXA13; KLF4 (directAnnotation).
PRKAR1Ametacluster_130.16ZNF705A (directAnnotation).
PRKAR1Ametacluster_136.3MAX; MXI1; MXI1; RFX1; RFX1; RFX1; RFX1; RFX1; RFX1; RFX1; RFX1; RFX1; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX3; RFX4; RFX4; RFX4; RFX4; RFX5; RFX5; RFX5; SREBF1; ZBTB7B (directAnnotation). RFX1; RFX1; RFX1; RFX1; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX2; RFX3; RFX3; RFX3; RFX3; RFX3; RFX4; RFX4; RFX4; RFX6; RFX6; RFX6; RFX7; RFX8; RFX8 (inferredBy_Orthology).
PRKAR1Ataipale_tf_pairs__ETV2_NHLH1_NCCGGAANNNNNNCAGCTGNN_CAP_reprETV2; NHLH1 (directAnnotation).
PRKAR1Ataipale_tf_pairs__GCM1_FOXI1_NTGTTGATRNGGGN_CAP_reprFOXI1; GCM1 (directAnnotation).
PRKAR1Ajaspar__MA1946.1FOXI1 (directAnnotation).
PRKAR1Atfdimers__MD00221FOXG1; FOXO1; GABPA (directAnnotation).
PRKAR1Ataipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
PRKAR1Ajaspar__MA1955.1FOXO1 (directAnnotation).
PRKAR1Atransfac_pro__M05785ZNF48 (inferredBy_Orthology).
PRKAR1Atransfac_pro__M12697ZNF142 (directAnnotation).
PRKAR1Atransfac_pro__M06173ZNF85 (directAnnotation).
PRKAR1Ajaspar__MA1650.1ZBTB14 (directAnnotation).
PRKAR1Atransfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
PRKAR1Atfdimers__MD00483ZBTB14 (directAnnotation).
PRKAR1Atfdimers__MD00364WT1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PRKAR1A"(Rp)-cAMPS"

DB01790

small molecule
PRKAR1A"Cyclic adenosine monophosphate"

DB02527

small molecule
PRKAR1A"Cyclic GMP"

DB02315

small molecule
PRKAR1A"GEM-231"

DB05798

biotech
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."