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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PKIB

Summary for PKIB

Gene informationGene symbol

PKIB

Ensembl ID

ENSG00000135549

Entrez ID

5570

Gene namecAMP-dependent protein kinase inhibitor beta
SynonymsPRKACN2
Gene typeprotein_coding
UniProtAcc

Q9C010


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Dataset with differentially expressed gene: PKIB

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.7220421.99e-18

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.8395355.44e-04

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postcDCs-0.3890831.10e-02

GSE158457

PDX cellsCell lineAcute lymphoblastic leukemiaT-cell acute lymphoblastic leukemia (ALL)Targeted therapydasatinibNAMalignant cells-0.3993550.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostcDCs0.2947454.88e-10

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.7322693.63e-33

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.8199589.81e-27

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.9724650.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.5454750.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells2.600920.00e+00

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Expression of PKIB in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PKIB

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PKIB

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PKIBhsa-miR-950095.9407NM_001270395
PKIBhsa-miR-4753-3p94.3983NM_001270393
PKIBhsa-miR-569693.4088NM_001270393
PKIBhsa-miR-4760-3p93.3843NM_001270395
PKIBhsa-miR-6511b-3p92.9527NM_001270395
PKIBhsa-miR-6511a-3p92.9527NM_001270395
PKIBhsa-miR-444889.8747NM_001270395
PKIBhsa-miR-383-3p89.0856NM_001270393
PKIBhsa-miR-848588.628NM_001270395
PKIBhsa-miR-548c-3p86.8417NM_001270395
PKIBhsa-miR-5003-5p86.1193NM_001270395
PKIBhsa-miR-63385.6119NM_001270395
PKIBhsa-miR-1229-3p84.96NM_001270395
PKIBhsa-miR-888-3p84.7912NM_001270395
PKIBhsa-miR-450a-1-3p82.8562NM_001270395
PKIBhsa-miR-6772-3p82.6598NM_001270395
PKIBhsa-miR-10527-5p81.821NM_001270393
PKIBhsa-miR-183-3p81.808NM_001270395
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Motifs and transcription factors (TFs) regulating PKIB

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PKIBmetacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
PKIBmetacluster_113.3MYBL1; MYBL1; MYBL2; MYBL2; OVOL1; OVOL2 (directAnnotation). MYB; MYBL1; MYBL1; MYBL1; MYBL1; MYBL2; OVOL1 (inferredBy_Orthology).
PKIBhdpi__MLXMLX (directAnnotation).
PKIBtaipale_tf_pairs__TFAP2C_MAX_TNSCCNNNGGSNNNCACGTGN_CAP_reprMAX; TFAP2C (directAnnotation).
PKIBtaipale_tf_pairs__GCM1_HOXB13_NCCCGCANNMATAAA_CAP_reprGCM1; HOXB13 (directAnnotation).
PKIBmetacluster_160.2FEZF1; FEZF2 (directAnnotation).
PKIBhocomoco__E2F8_HUMAN.H11MO.0.DE2F8 (directAnnotation).
PKIBtransfac_pro__M06096ZNF682 (directAnnotation).
PKIBhomer__TACGTGCV_HIF-1aHIF1A (directAnnotation).
PKIBtransfac_pro__M05919ZIM3 (directAnnotation).
PKIBtransfac_pro__M06678ZNF287 (inferredBy_Orthology).
PKIBkznf__ZNF354B_Imbeault2017_RP_RCADEZNF354B (directAnnotation).
PKIBtransfac_pro__M06062ZNF623 (directAnnotation).
PKIBtfdimers__MD00581ATF5; NKX3-2 (directAnnotation).
PKIBmetacluster_79.34GATA2; GATA5 (directAnnotation).
PKIBtfdimers__MD00302IRF7; IRF8 (directAnnotation).
PKIBmetacluster_82.6ZNF211 (directAnnotation).
PKIBmetacluster_141.4GLIS2 (directAnnotation).
PKIBtaipale_tf_pairs__CEBPG_ELF1_TTGCGYAANNSCGGAAGN_CAP_reprCEBPG; ELF1 (directAnnotation).
PKIBhocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
PKIBtransfac_pro__M06486ZNF610 (directAnnotation).
PKIBmetacluster_178.20ZKSCAN1 (directAnnotation). ZKSCAN1 (inferredBy_Orthology).
PKIBtaipale_tf_pairs__MYCL2_SCACGTGS_HTMYCLP1 (directAnnotation).
PKIBmetacluster_141.2E2F2; E2F3 (directAnnotation).
PKIBtransfac_pro__M05972ZNF701 (directAnnotation).
PKIBtransfac_pro__M06064ZNF729 (directAnnotation).
PKIBtransfac_pro__M06603ZNF560 (directAnnotation).
PKIBkznf__ZIM2_Imbeault2017_OM_MEMEZIM2 (directAnnotation).
PKIBtaipale_tf_pairs__ERF_HOXA3_RSCGGAWNNNNNNNYMATTA_CAP_reprERF; HOXA3 (directAnnotation).
PKIBmetacluster_31.3ZSCAN20; ZSCAN29 (directAnnotation).
PKIBjaspar__MA1532.2NR1D2 (directAnnotation).
PKIBhdpi__CREB1CREB1 (directAnnotation).
PKIBtransfac_pro__M06161ZNF117 (directAnnotation).
PKIBtaipale_cyt_meth__NKX2-3_NTCGTTGAN_eDBD_methNKX2-3 (directAnnotation).
PKIBtransfac_public__M00077GATA3 (directAnnotation).
PKIBtransfac_pro__M06936MAFF (inferredBy_Orthology).
PKIBtfdimers__MD00158DBP; ZNF354C (directAnnotation).
PKIBtransfac_pro__M05737ZNF699 (directAnnotation).
PKIBtransfac_pro__M06458ZNF441 (directAnnotation).
PKIBmetacluster_168.3NR4A1 (directAnnotation).
PKIBtransfac_pro__M04955ZBTB33 (directAnnotation).
PKIBmetacluster_75.4SCRT1 (directAnnotation).
PKIBtaipale_tf_pairs__CLOCK_FIGLA_NCASSTGKNNNNNNNNNCACGTGN_CAP_reprCLOCK; FIGLA (directAnnotation).
PKIBtransfac_pro__M06048ZNF208 (directAnnotation).
PKIBtransfac_pro__M07362NANOG (directAnnotation). NANOGP8 (inferredBy_Orthology).
PKIBtaipale_tf_pairs__TEAD4_HOXB13_RRAATGCARTAAA_CAP_reprHOXB13; TEAD4 (directAnnotation).
PKIBtransfac_pro__M06349ZNF629 (inferredBy_Orthology).
PKIBtransfac_pro__M06322ZNF181 (directAnnotation).
PKIBtransfac_pro__M06267ZNF805 (directAnnotation).
PKIBmetacluster_179.2ZNF418 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."