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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PITPNC1

Summary for PITPNC1

Gene informationGene symbol

PITPNC1

Ensembl ID

ENSG00000154217

Entrez ID

26207

Gene namephosphatidylinositol transfer protein cytoplasmic 1
SynonymsRDGB-BETA|RDGBB|RDGBB1
Gene typeprotein_coding
UniProtAcc

Q9UKF7


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Dataset with differentially expressed gene: PITPNC1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.236215.96e-05

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.2661270.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.50730.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3559260.00e+00

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Expression of PITPNC1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PITPNC1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PITPNC1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PITPNC1hsa-miR-5011-5p100NM_181671
PITPNC1hsa-miR-190a-3p99.988NM_181671
PITPNC1hsa-miR-26a-5p98.954NM_181671
PITPNC1hsa-miR-26b-5p98.954NM_181671
PITPNC1hsa-miR-129798.9497NM_181671
PITPNC1hsa-miR-446598.6052NM_181671
PITPNC1hsa-miR-120097.61NM_181671
PITPNC1hsa-miR-3529-3p96.8815NM_181671
PITPNC1hsa-miR-196a-1-3p96.2668NM_012417
PITPNC1hsa-miR-449a96.2144NM_181671
PITPNC1hsa-miR-34a-5p96.2144NM_181671
PITPNC1hsa-miR-34c-5p95.7335NM_181671
PITPNC1hsa-miR-449b-5p95.7335NM_181671
PITPNC1hsa-miR-570294.5897NM_012417
PITPNC1hsa-miR-428294.3656NM_181671
PITPNC1hsa-miR-10527-5p93.9037NM_181671
PITPNC1hsa-miR-7114-5p93.0927NM_181671
PITPNC1hsa-miR-1251-3p91.4952NM_181671
PITPNC1hsa-miR-442290.4605NM_181671
PITPNC1hsa-miR-1213189.7726NM_012417
PITPNC1hsa-miR-4723-3p89.7326NM_012417
PITPNC1hsa-miR-6769b-3p89.7326NM_012417
PITPNC1hsa-miR-318389.7326NM_012417
PITPNC1hsa-miR-7153-3p89.375NM_181671
PITPNC1hsa-miR-548p89.3198NM_181671
PITPNC1hsa-miR-544b88.569NM_181671
PITPNC1hsa-miR-472988.4377NM_012417
PITPNC1hsa-miR-432487.8622NM_181671
PITPNC1hsa-miR-316387.7542NM_012417
PITPNC1hsa-miR-3135b87.6413NM_181671
PITPNC1hsa-miR-24-3p86.4894NM_012417
PITPNC1hsa-miR-429186.3648NM_181671
PITPNC1hsa-miR-4633-5p86.3414NM_181671
PITPNC1hsa-miR-60785.6191NM_181671
PITPNC1hsa-miR-23b-3p85.4027NM_012417
PITPNC1hsa-miR-23a-3p85.4027NM_012417
PITPNC1hsa-miR-23c85.4027NM_012417
PITPNC1hsa-miR-6771-3p84.9507NM_181671
PITPNC1hsa-miR-4753-3p84.5217NM_012417
PITPNC1hsa-miR-312384.509NM_012417
PITPNC1hsa-miR-950084.1183NM_012417
PITPNC1hsa-miR-550a-3p83.2302NM_012417
PITPNC1hsa-miR-200c-5p82.245NM_012417
PITPNC1hsa-miR-6765-3p81.4061NM_181671
PITPNC1hsa-miR-3121-5p81.2056NM_181671
PITPNC1hsa-miR-46681.0119NM_012417
PITPNC1hsa-miR-205280.8635NM_012417
PITPNC1hsa-miR-6832-5p80.1208NM_012417
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Motifs and transcription factors (TFs) regulating PITPNC1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PITPNC1metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PITPNC1transfac_pro__M00800TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PITPNC1cisbp__M00343PAX6 (directAnnotation).
PITPNC1transfac_pro__M12697ZNF142 (directAnnotation).
PITPNC1metacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
PITPNC1transfac_pro__M00938E2F1 (directAnnotation).
PITPNC1kznf__ZNF267_Imbeault2017_RP_RCADEZNF267 (directAnnotation).
PITPNC1transfac_pro__M12694ZFP14 (directAnnotation).
PITPNC1transfac_pro__M01253CNOT3 (directAnnotation).
PITPNC1taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
PITPNC1transfac_pro__M02090E2F4 (directAnnotation).
PITPNC1metacluster_24.1HIC1; HIC1; ZNF816; ZNF816; ZNF816; ZXDC (directAnnotation).
PITPNC1metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
PITPNC1transfac_pro__M07437ZBTB2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."