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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PHACTR1

Summary for PHACTR1

Gene informationGene symbol

PHACTR1

Ensembl ID

ENSG00000112137

Entrez ID

221692

Gene namephosphatase and actin regulator 1
SynonymsdJ257A7.2|KIAA1733|RPEL1
Gene typeprotein_coding
UniProtAcc

Q9C0D0


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Dataset with differentially expressed gene: PHACTR1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.4392991.55e-16

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.4684284.07e-09

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells1.137340.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostcDCs-0.570421.64e-37

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.730190.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMono/Macro-0.2848524.44e-36

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells0.4616580.00e+00

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Expression of PHACTR1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PHACTR1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PHACTR1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PHACTR1hsa-miR-371495.4881NM_001242648
PHACTR1hsa-miR-218-2-3p94.3388NM_001322314
PHACTR1hsa-miR-205294.3167NM_001242648
PHACTR1hsa-miR-4659b-3p94.0216NM_001322314
PHACTR1hsa-miR-4659a-3p94.0216NM_001322314
PHACTR1hsa-miR-63491.8055NM_001242648
PHACTR1hsa-miR-4725-3p91.3427NM_001322314
PHACTR1hsa-miR-6780b-5p91.3427NM_001322314
PHACTR1hsa-miR-2682-5p91.251NM_001242648
PHACTR1hsa-miR-34b-5p91.251NM_001242648
PHACTR1hsa-miR-449c-5p91.251NM_001242648
PHACTR1hsa-miR-430790.4323NM_001242648
PHACTR1hsa-miR-548an90.296NM_001242648
PHACTR1hsa-miR-427189.5348NM_001322314
PHACTR1hsa-miR-758-5p89.4556NM_001242648
PHACTR1hsa-miR-383-3p88.6307NM_001242648
PHACTR1hsa-miR-584-5p88.1825NM_001242648
PHACTR1hsa-miR-548au-3p88.0092NM_001242648
PHACTR1hsa-miR-6756-3p83.6397NM_001322314
PHACTR1hsa-miR-3127-3p83.6397NM_001322314
PHACTR1hsa-miR-361-3p81.1756NM_001322314
PHACTR1hsa-miR-182-3p80.2237NM_001322314
PHACTR1hsa-miR-597-3p80.2237NM_001322314
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Motifs and transcription factors (TFs) regulating PHACTR1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PHACTR1hocomoco__OTX1_HUMAN.H11MO.0.DOTX1 (directAnnotation).
PHACTR1taipale_tf_pairs__GCM1_MAX_CACGTGNNNGCGGGY_CAPGCM1; MAX (directAnnotation).
PHACTR1swissregulon__hs__DBPDBP (directAnnotation).
PHACTR1tfdimers__MD00411ELF5; YY1 (directAnnotation).
PHACTR1taipale_tf_pairs__GCM1_MAX_NNCACGTGNNNGCGGGYN_CAP_reprGCM1; MAX (directAnnotation).
PHACTR1transfac_pro__M06346E4F1 (directAnnotation).
PHACTR1transfac_pro__M06217ZNF169 (directAnnotation).
PHACTR1cisbp__M00809PRDM11 (inferredBy_Orthology).
PHACTR1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
PHACTR1homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
PHACTR1taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
PHACTR1metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
PHACTR1tfdimers__MD00299ETS1; SRY (directAnnotation).
PHACTR1tfdimers__MD00143IKZF1; MZF1 (directAnnotation).
PHACTR1metacluster_162.5NR1D1; NR1D1; RORA; RORA; RORA; RORA; RORA; RORC; RORC (directAnnotation). NR1D1; PPARG; RORA; RORC (inferredBy_Orthology).
PHACTR1taipale_tf_pairs__POU2F1_SOX15_WTGMATAACAATR_CAP_1POU2F1; SOX15 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."