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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PCM1

Summary for PCM1

Gene informationGene symbol

PCM1

Ensembl ID

ENSG00000078674

Entrez ID

5108

Gene namepericentriolar material 1
SynonymsPTC4
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PCM1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.3962332.82e-18

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.4876962.61e-05

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.3414823.02e-28

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.4003360.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.2689870.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.3213760.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.2536292.53e-31

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6403410.00e+00

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Expression of PCM1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PCM1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PCM1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PCM1hsa-miR-1185-1-3p97.0421NM_006197
PCM1hsa-miR-1185-2-3p97.0421NM_006197
PCM1hsa-let-7f-2-3p97.0421NM_006197
PCM1hsa-miR-58694.1736NM_006197
PCM1hsa-miR-568394.1591NM_006197
PCM1hsa-miR-495-3p91.5344NM_006197
PCM1hsa-miR-568891.0581NM_006197
PCM1hsa-miR-211089.7521NM_006197
PCM1hsa-miR-625-5p89.3145NM_006197
PCM1hsa-miR-499a-3p89.0525NM_001315507
PCM1hsa-miR-499b-3p89.0525NM_001315507
PCM1hsa-miR-548at-5p88.2269NM_006197
PCM1hsa-miR-1211587.0779NM_006197
PCM1hsa-miR-569686.899NM_006197
PCM1hsa-miR-548e-5p86.3941NM_006197
PCM1hsa-miR-329-5p85.0626NM_006197
PCM1hsa-miR-4796-3p85.0273NM_006197
PCM1hsa-miR-32-3p84.092NM_001315507
PCM1hsa-miR-335-3p84.0256NM_006197
PCM1hsa-miR-4668-5p83.5123NM_006197
PCM1hsa-miR-670-5p82.6056NM_006197
PCM1hsa-miR-430282.5529NM_001315507
PCM1hsa-miR-3129-3p82.3309NM_006197
PCM1hsa-miR-5583-5p82.3309NM_006197
PCM1hsa-miR-7110-3p82.181NM_006197
PCM1hsa-miR-6867-3p82.0937NM_006197
PCM1hsa-miR-393581.5718NM_006197
PCM1hsa-miR-148a-5p81.5602NM_006197
PCM1hsa-miR-6794-5p81.139NM_006197
PCM1hsa-miR-4716-3p81.139NM_006197
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Motifs and transcription factors (TFs) regulating PCM1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PCM1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
PCM1cisbp__M00788ZFY (inferredBy_Orthology).
PCM1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
PCM1metacluster_175.1ZNF283 (directAnnotation).
PCM1hdpi__ZNF304ZNF304 (directAnnotation).
PCM1transfac_pro__M02844BCL6B (inferredBy_Orthology).
PCM1metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
PCM1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PCM1transfac_pro__M01199TRIM28 (directAnnotation).
PCM1kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
PCM1transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PCM1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PCM1transfac_pro__M03806ZBTB7C (directAnnotation).
PCM1transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PCM1transfac_pro__M02913SP140 (inferredBy_Orthology).
PCM1transfac_pro__M01090SMAD9 (inferredBy_Orthology).
PCM1transfac_pro__M01088DEAF1 (inferredBy_Orthology).
PCM1flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
PCM1transfac_pro__M00430E2F1 (directAnnotation).
PCM1metacluster_126.3LIN28B; LIN28B (directAnnotation).
PCM1transfac_pro__M04893TAF1 (directAnnotation).
PCM1transfac_pro__M02865GMEB1 (inferredBy_Orthology).
PCM1transfac_pro__M08894OVOL1; OVOL2 (directAnnotation).
PCM1hdpi__HIP2UBE2K (directAnnotation).
PCM1kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
PCM1idmmpmm__MadSMAD9 (inferredBy_Orthology).
PCM1metacluster_191.5SPDEF (inferredBy_Orthology).
PCM1transfac_pro__M00938E2F1 (directAnnotation).
PCM1transfac_pro__M01238DEAF1 (inferredBy_Orthology).
PCM1taipale_cyt_meth__ZBTB37_NYACCGCRNNYACCGYR_eDBD_meth_reprZBTB37 (directAnnotation).
PCM1dbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
PCM1hdpi__RARARARA (directAnnotation).
PCM1hdpi__ELF2ELF2 (directAnnotation).
PCM1taipale_tf_pairs__TFAP2C_DLX3_NSCCNNNRGGCANNNNNNTAATKR_CAP_reprDLX3; TFAP2C (directAnnotation).
PCM1taipale_tf_pairs__ERF_PITX1_NSCGGANNNNNNGGMTTA_CAPERF; PITX1 (directAnnotation).
PCM1jaspar__MA1583.1ZFP57 (directAnnotation).
PCM1transfac_pro__M02898SMAD3 (directAnnotation).
PCM1hdpi__HTATIP2HTATIP2 (directAnnotation).
PCM1jaspar__MA1721.1ZNF93 (directAnnotation).
PCM1transfac_pro__M04916TAF1 (directAnnotation).
PCM1jaspar__MA1122.1TFDP1 (directAnnotation).
PCM1metacluster_19.6GMEB1 (directAnnotation). GMEB1 (inferredBy_Orthology).
PCM1transfac_pro__M07310SP5 (directAnnotation).
PCM1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PCM1kznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
PCM1taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
PCM1cisbp__M00249WT1 (directAnnotation).
PCM1metacluster_66.4ARNT2; NR0B1; NR0B1; ZSCAN5A; ZSCAN5A (directAnnotation). ARNT2 (inferredBy_Orthology).
PCM1metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
PCM1metacluster_45.6E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F4; E2F4 (directAnnotation). E2F2; E2F3 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."