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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: MCM4

Summary for MCM4

Gene informationGene symbol

MCM4

Ensembl ID

ENSG00000104738

Entrez ID

4173

Gene nameminichromosome maintenance complex component 4
SynonymsCDC21|CDC54|hCdc21|MGC33310|P1-Cdc21
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: MCM4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.4861653.73e-30

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.440760.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreErythrocytes-0.2694674.53e-13

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-1.018180.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.4687670.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreProgenitors-0.4703274.61e-02

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Expression of MCM4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to MCM4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating MCM4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
MCM4hsa-miR-371b-5p96.5511NM_182746
MCM4hsa-miR-616-5p96.5511NM_182746
MCM4hsa-miR-373-5p96.5511NM_182746
MCM4hsa-miR-472995.3188NM_005914
MCM4hsa-miR-216b-5p89.8258NM_182746
MCM4hsa-miR-3613-3p89.1357NM_182746
MCM4hsa-miR-6800-3p87.3065NM_182746
MCM4hsa-miR-58782.7907NM_182746
MCM4hsa-miR-23b-3p82.7727NM_182746
MCM4hsa-miR-23a-3p82.7727NM_182746
MCM4hsa-miR-23c82.7727NM_182746
MCM4hsa-miR-6796-3p80.3646NM_182746
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Motifs and transcription factors (TFs) regulating MCM4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
MCM4metacluster_47.6FOXH1 (directAnnotation).
MCM4metacluster_184.45ALX1 (inferredBy_Orthology).
MCM4metacluster_161.15NKX3-1 (directAnnotation).
MCM4dbtfbs__mm_TBP_CH12.LX_ENCSR000ERP_merged_N1TBP (inferredBy_Orthology).
MCM4taipale_tf_pairs__MEIS1_DRGX_TGTCAATTA_CAP_reprDRGX; MEIS1 (directAnnotation).
MCM4tfdimers__MD00580CRX; HOXA10 (directAnnotation).
MCM4metacluster_165.2FOXH1 (directAnnotation).
MCM4kznf__ZNF613_Imbeault2017_RP_RCADEZNF613 (directAnnotation).
MCM4transfac_pro__M06130ZNF254 (directAnnotation).
MCM4metacluster_161.16NKX3-2 (directAnnotation).
MCM4metacluster_184.43ALX3 (inferredBy_Orthology).
MCM4transfac_pro__M06953VAX1 (inferredBy_Orthology).
MCM4transfac_pro__M06452ZNF567 (directAnnotation).
MCM4tfdimers__MD00055KLF4; ZNF333 (directAnnotation).
MCM4kznf__ZNF418_Imbeault2017_RP_ChIP-seqZNF418 (directAnnotation).
MCM4tfdimers__MD00207HOXA13; PDX1 (directAnnotation).
MCM4metacluster_22.13MAFK (inferredBy_Orthology).
MCM4metacluster_161.14ISX (directAnnotation).
MCM4hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
MCM4metacluster_141.2E2F2; E2F3 (directAnnotation).
MCM4transfac_pro__M04844MAX (directAnnotation).
MCM4taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_reprZNF385D (directAnnotation).
MCM4taipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."