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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: LMO7

Summary for LMO7

Gene informationGene symbol

LMO7

Ensembl ID

ENSG00000136153

Entrez ID

4008

Gene nameLIM domain 7
SynonymsFBX20|FBXO20|KIAA0858
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: LMO7

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.3458240.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.8295144.84e-36

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.4263330.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.606260.00e+00

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Expression of LMO7 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LMO7

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating LMO7

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LMO7hsa-miR-5692a99.5863NM_001306080
LMO7hsa-miR-10527-5p98.7177NM_001306080
LMO7hsa-miR-340-5p97.5536NM_001306080
LMO7hsa-miR-365895.7826NM_015842
LMO7hsa-miR-367195.335NM_015842
LMO7hsa-miR-877-3p93.7914NM_001306080
LMO7hsa-miR-323a-3p93.4595NM_015842
LMO7hsa-miR-60791.6716NM_015842
LMO7hsa-miR-4711-5p90.6723NM_015842
LMO7hsa-miR-6835-3p90.1732NM_001306080
LMO7hsa-miR-3529-3p90.0186NM_001306080
LMO7hsa-miR-335-3p89.8658NM_001306080
LMO7hsa-miR-522-3p88.9798NM_001306080
LMO7hsa-miR-224-3p88.9798NM_001306080
LMO7hsa-miR-426088.9119NM_015842
LMO7hsa-miR-4724-3p88.8361NM_001306080
LMO7hsa-miR-20a-3p88.1769NM_015842
LMO7hsa-miR-4772-3p87.9582NM_001306080
LMO7hsa-miR-468687.956NM_001306080
LMO7hsa-miR-33a-3p87.4005NM_015842
LMO7hsa-miR-217-5p87.1964NM_015842
LMO7hsa-miR-5011-5p86.6857NM_015842
LMO7hsa-miR-449086.3099NM_015842
LMO7hsa-miR-7853-5p86.2971NM_001306080
LMO7hsa-miR-105-5p86.2971NM_001306080
LMO7hsa-miR-570085.3043NM_001306080
LMO7hsa-miR-3160-5p84.5588NM_001306080
LMO7hsa-miR-6807-3p84.3183NM_015842
LMO7hsa-miR-6857-5p83.4331NM_015842
LMO7hsa-miR-608382.798NM_001306080
LMO7hsa-miR-3613-3p82.3467NM_001306080
LMO7hsa-miR-450a-2-3p82.0897NM_015842
LMO7hsa-miR-392481.7718NM_015842
LMO7hsa-miR-548c-3p81.5047NM_015842
LMO7hsa-miR-5692c81.289NM_015842
LMO7hsa-miR-5692b81.289NM_015842
LMO7hsa-miR-10397-3p80.9309NM_001306080
LMO7hsa-miR-469280.1548NM_015842
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Motifs and transcription factors (TFs) regulating LMO7

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LMO7cisbp__M00968MTF2 (directAnnotation).
LMO7metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
LMO7metacluster_160.20JUND; PRDM15 (directAnnotation).
LMO7cisbp__M00341PAX6 (directAnnotation).
LMO7metacluster_198.3ZFP64 (directAnnotation).
LMO7metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
LMO7jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
LMO7metacluster_61.1DEAF1; DEAF1 (directAnnotation).
LMO7cisbp__M00788ZFY (inferredBy_Orthology).
LMO7kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
LMO7metacluster_175.1ZNF283 (directAnnotation).
LMO7hdpi__ZNF304ZNF304 (directAnnotation).
LMO7transfac_pro__M02844BCL6B (inferredBy_Orthology).
LMO7metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
LMO7metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
LMO7transfac_pro__M01199TRIM28 (directAnnotation).
LMO7kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
LMO7metacluster_151.2ZNF23 (directAnnotation).
LMO7transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
LMO7transfac_pro__M03806ZBTB7C (directAnnotation).
LMO7transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
LMO7transfac_pro__M12697ZNF142 (directAnnotation).
LMO7taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
LMO7dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
LMO7transfac_pro__M06173ZNF85 (directAnnotation).
LMO7jaspar__MA1650.1ZBTB14 (directAnnotation).
LMO7transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
LMO7transfac_pro__M00322MAX; MYC (directAnnotation).
LMO7tfdimers__MD00483ZBTB14 (directAnnotation).
LMO7transfac_pro__M06085ZNF26 (directAnnotation).
LMO7kznf__ZNF846_Imbeault2017_OM_MEMEZNF846 (directAnnotation).
LMO7tfdimers__MD00364WT1 (directAnnotation).
LMO7transfac_pro__M04817ZBTB33 (directAnnotation).
LMO7dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
LMO7transfac_pro__M01253CNOT3 (directAnnotation).
LMO7metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."