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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: KDM6A

Summary for KDM6A

Gene informationGene symbol

KDM6A

Ensembl ID

ENSG00000147050

Entrez ID

7403

Gene namelysine demethylase 6A
SynonymsUTX
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: KDM6A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.284870.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells0.2579130.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.2603294.50e-42

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Expression of KDM6A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KDM6A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating KDM6A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KDM6Ahsa-miR-5011-5p100NM_001291415
KDM6Ahsa-miR-190a-3p99.9893NM_001291415
KDM6Ahsa-miR-471998.8847NM_001291415
KDM6Ahsa-miR-316397.3536NM_001291415
KDM6Ahsa-let-7f-1-3p97.1924NM_001291415
KDM6Ahsa-miR-98-3p97.1924NM_001291415
KDM6Ahsa-let-7a-3p97.1924NM_001291415
KDM6Ahsa-let-7b-3p97.1924NM_001291415
KDM6Ahsa-miR-23a-3p96.1557NM_001291415
KDM6Ahsa-miR-23b-3p96.1557NM_001291415
KDM6Ahsa-miR-23c96.1557NM_001291415
KDM6Ahsa-miR-3942-5p96.0751NM_001291415
KDM6Ahsa-miR-4703-5p96.0751NM_001291415
KDM6Ahsa-miR-432895.5287NM_001291415
KDM6Ahsa-miR-715094.9604NM_001291415
KDM6Ahsa-miR-539-5p94.149NM_001291415
KDM6Ahsa-miR-428294.0907NM_001291415
KDM6Ahsa-miR-1-5p93.9486NM_001291415
KDM6Ahsa-miR-5003-3p93.6132NM_001291415
KDM6Ahsa-miR-758-3p93.4473NM_001291415
KDM6Ahsa-miR-1277-5p93.1282NM_001291415
KDM6Ahsa-miR-46692.8387NM_001291415
KDM6Ahsa-miR-224-5p92.6576NM_001291415
KDM6Ahsa-miR-875-3p92.3069NM_001291415
KDM6Ahsa-miR-498-5p91.9234NM_001291415
KDM6Ahsa-miR-199b-3p90.6903NM_001291415
KDM6Ahsa-miR-3129-5p90.6903NM_001291415
KDM6Ahsa-miR-199a-3p90.6903NM_001291415
KDM6Ahsa-miR-30090.6193NM_001291415
KDM6Ahsa-miR-381-3p90.6193NM_001291415
KDM6Ahsa-miR-3140-5p90.3594NM_001291415
KDM6Ahsa-miR-4687-3p89.7248NM_001291415
KDM6Ahsa-miR-548e-5p89.1688NM_001291415
KDM6Ahsa-miR-513a-3p88.9109NM_001291415
KDM6Ahsa-miR-513c-3p88.9109NM_001291415
KDM6Ahsa-miR-153-3p88.8594NM_001291415
KDM6Ahsa-miR-5006-5p88.2995NM_001291415
KDM6Ahsa-miR-397288.2246NM_001291415
KDM6Ahsa-miR-120288.2246NM_001291415
KDM6Ahsa-miR-93688.0333NM_001291415
KDM6Ahsa-miR-391488.0265NM_001291415
KDM6Ahsa-miR-4666a-3p87.7844NM_001291415
KDM6Ahsa-miR-6719-3p87.726NM_001291415
KDM6Ahsa-miR-129987.6158NM_001291415
KDM6Ahsa-miR-656-3p87.5061NM_001291415
KDM6Ahsa-miR-3606-3p87.2238NM_001291415
KDM6Ahsa-miR-4690-3p87.027NM_001291415
KDM6Ahsa-miR-568587.027NM_001291415
KDM6Ahsa-miR-7159-3p86.9733NM_001291415
KDM6Ahsa-miR-4482-3p86.9733NM_001291415
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Motifs and transcription factors (TFs) regulating KDM6A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
KDM6Atransfac_pro__M12694ZFP14 (directAnnotation).
KDM6Atransfac_pro__M01253CNOT3 (directAnnotation).
KDM6Atransfac_pro__M04617ZBTB7A (directAnnotation).
KDM6Ataipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
KDM6Ametacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
KDM6Atransfac_pro__M02090E2F4 (directAnnotation).
KDM6Ametacluster_24.1HIC1; HIC1; ZNF816; ZNF816; ZNF816; ZXDC (directAnnotation).
KDM6Ametacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
KDM6Atransfac_pro__M07437ZBTB2 (directAnnotation).
KDM6Atransfac_pro__M01861ATF1 (directAnnotation).
KDM6Adbtfbs__GMEB2_HepG2_ENCSR745VSQ_merged_N1GMEB2 (directAnnotation).
KDM6Ametacluster_111.4ATF1; ATF1; ATF1; ATF1; ATF1; ATF1; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF3; ATF3; ATF3; ATF3; ATF3; ATF4; ATF4; ATF5; ATF6; ATF6B; ATF7; ATF7; ATF7; BATF3; BATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB3; CREB3L4; CREB3L4; CREB5; CREB5; CREB5; CREM; CREM; CREM; CREM; CREM; FOSB; FOSL1; FOSL1; FOSL2; JDP2; JDP2; JDP2; JUN; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; XBP1; XBP1; XBP1; ZNF629 (directAnnotation). ATF1; ATF1; ATF1; ATF2; ATF2; ATF3; ATF6; ATF6B; ATF7; ATF7; ATF7; ATF7-NPFF; ATF7-NPFF; ATF7-NPFF; ATF7-NPFF; BATF; BATF2; BATF3; CREB1; CREB1; CREB3; CREB3L1; CREB3L2; CREB3L3; CREB3L4; CREM; FOS; FOSB; FOSL1; FOSL2; JDP2; JDP2 (inferredBy_Orthology).
KDM6Ahdpi__TIMELESSTIMELESS (directAnnotation).
KDM6Ahocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
KDM6Ametacluster_111.3ATF1; ATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREM; CREM; CREM; CREM; E4F1; E4F1 (directAnnotation). CREB1; CREB1; CREM; JDP2 (inferredBy_Orthology).
KDM6Ataipale_tf_pairs__ETV5_FOXI1_TGTTGNCGGAWRN_CAPETV5; FOXI1 (directAnnotation).
KDM6Ametacluster_148.1ATF2; ATF2; ATF3; ATF3; ATF3; ATF3; ATF4; ATF4; ATF6; ATF6; ATF6B; ATF7; BATF3; BATF3; CREB1; CREB1; CREB1; CREB3; CREB3; CREB5; CREB5; CREB5; CREM; CREM; FOS; FOS; FOSB; FOSB; FOSB; FOSL1; JDP2; JDP2; JUN; JUN; JUN; JUNB; JUND; MAF; MAF; MAFA; MAFA; MAFF; MAFF; MAFF; MAFF; MAFG; MAFG; ZBTB21 (directAnnotation). ATF1; ATF1; ATF1; ATF1; ATF6; ATF6; ATF6; ATF6; ATF6B; ATF6B; ATF6B; ATF6B; CREB1; CREB1; CREB3; CREB3; CREB3; CREB3; CREB3L1; CREB3L1; CREB3L1; CREB3L1; CREB3L2; CREB3L2; CREB3L2; CREB3L2; CREB3L3; CREB3L3; CREB3L3; CREB3L3; CREB3L4; CREB3L4; CREB3L4; CREB3L4; CREM; CREM; CREM; CREM; JDP2; JUN; JUNB; JUND; MAFB (inferredBy_Orthology).
KDM6Atransfac_pro__M06208ZNF460 (directAnnotation).
KDM6Ametacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
KDM6Ataipale_tf_pairs__ERF_FOXI1_TGTTKMCGGAWRN_CAP_reprERF; FOXI1 (directAnnotation).
KDM6Atransfac_pro__M06545ZNF485 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."