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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: KCNAB2

Summary for KCNAB2

Gene informationGene symbol

KCNAB2

Ensembl ID

ENSG00000069424

Entrez ID

8514

Gene namepotassium voltage-gated channel subfamily A regulatory beta subunit 2
SynonymsAKR6A5|HKvbeta2.1|HKvbeta2.2|KCNA2B
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: KCNAB2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.2572123.36e-06

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postCD8+ T cells0.2559270.00e+00

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)preCD8+ T cells0.3025750.00e+00

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)preNK cells0.3645230.00e+00

GSE164237

patientsPeripheral blood mononuclear cellsMelanomaAdvanced stages of melanoma ImmunotherapypembrolizumabpreCD8+ T cells-0.3556960.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.2918840.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.9428660.00e+00

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Expression of KCNAB2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KCNAB2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating KCNAB2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KCNAB2hsa-miR-448397.4656NM_001199861
KCNAB2hsa-miR-444797.1163NM_001199861
KCNAB2hsa-miR-129396.158NM_001199861
KCNAB2hsa-miR-66194.2236NM_001199861
KCNAB2hsa-miR-194-3p94.1914NM_001199861
KCNAB2hsa-miR-6756-5p93.4807NM_001199861
KCNAB2hsa-miR-6766-5p92.7159NM_001199861
KCNAB2hsa-miR-58792.1505NM_001199860
KCNAB2hsa-miR-191391.074NM_001199861
KCNAB2hsa-miR-210-5p91.0455NM_001199860
KCNAB2hsa-miR-447290.8312NM_001199861
KCNAB2hsa-miR-6752-3p90.6018NM_001199860
KCNAB2hsa-miR-486-3p87.6217NM_001199861
KCNAB2hsa-miR-18a-3p85.1656NM_001199860
KCNAB2hsa-miR-10398-5p82.6103NM_001199861
KCNAB2hsa-miR-6848-5p82.4093NM_001199861
KCNAB2hsa-miR-6846-5p82.4093NM_001199861
KCNAB2hsa-miR-808581.5917NM_001199861
KCNAB2hsa-miR-448180.8387NM_001199861
KCNAB2hsa-miR-3667-3p80.5829NM_001199860
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Motifs and transcription factors (TFs) regulating KCNAB2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
KCNAB2transfac_pro__M05533ZNF589 (directAnnotation).
KCNAB2jaspar__MA1645.1NKX2-2 (directAnnotation).
KCNAB2metacluster_28.3NKX2-1 (directAnnotation). NKX2-1; NKX2-2; NKX2-2; NKX2-5 (inferredBy_Orthology).
KCNAB2transfac_pro__M05939ZNF471 (directAnnotation).
KCNAB2transfac_pro__M05967ZFP30 (directAnnotation).
KCNAB2kznf__ZNF45_Imbeault2017_RP_ChIP-seqZNF45 (directAnnotation).
KCNAB2tfdimers__MD00174PDX1; STAT6 (directAnnotation).
KCNAB2tfdimers__MD00180MAFA (directAnnotation).
KCNAB2tfdimers__MD00147ELF5; TFAP2C (directAnnotation).
KCNAB2tfdimers__MD00405HLTF; IRF1 (directAnnotation).
KCNAB2tfdimers__MD00504ELF1; NFIA; NFIC (directAnnotation).
KCNAB2metacluster_20.3BARHL2; BARHL2 (directAnnotation).
KCNAB2transfac_pro__M01119ZBTB33 (directAnnotation).
KCNAB2transfac_public__M00271RUNX1 (directAnnotation).
KCNAB2metacluster_147.4SMAD2; SMAD3; SMAD4; SMAD4 (directAnnotation).
KCNAB2transfac_pro__M06150ZNF81 (directAnnotation).
KCNAB2taipale_tf_pairs__ELK1_FOXI1_RSCGGAANNRTMAAYA_CAP_reprELK1; FOXI1 (directAnnotation).
KCNAB2tfdimers__MD00528NEUROD1 (directAnnotation).
KCNAB2transfac_pro__M06849ZNF528 (directAnnotation).
KCNAB2metacluster_90.5NR5A2; NR5A2 (directAnnotation). ESRRB; NR5A1; NR5A1; NR5A1; NR5A2; NR5A2; NR5A2 (inferredBy_Orthology).
KCNAB2kznf__ZNF790_Imbeault2017_RP_ChIP-seqZNF790 (directAnnotation).
KCNAB2metacluster_79.10ZNF33A (directAnnotation).
KCNAB2cisbp__M07803MYC (directAnnotation).
KCNAB2jaspar__MA1106.1HIF1A (directAnnotation).
KCNAB2cisbp__M05832MAX (directAnnotation).
KCNAB2taipale_tf_pairs__MYCL2_SCACGTGS_HTMYCLP1 (directAnnotation).
KCNAB2transfac_pro__M06313ZNF678 (directAnnotation).
KCNAB2swissregulon__hs__ETV6ETV6 (directAnnotation).
KCNAB2transfac_pro__M06854ZNF600 (directAnnotation).
KCNAB2jaspar__MA0684.2RUNX3 (directAnnotation).
KCNAB2transfac_pro__M02113POU2AF1 (directAnnotation).
KCNAB2metacluster_10.45MXD3 (directAnnotation).
KCNAB2metacluster_10.46MAX (inferredBy_Orthology).
KCNAB2tfdimers__MD00048CDX2; IKZF1 (directAnnotation).
KCNAB2c2h2_zfs__M0404ZFP3 (inferredBy_Orthology).
KCNAB2taipale_tf_pairs__GCM1_FIGLA_CAGCTGNNNNNNNNTGCGGG_CAPFIGLA; GCM1 (directAnnotation).
KCNAB2kznf__ZNF184_Schmitges2016_RCADEZNF184 (directAnnotation).
KCNAB2homer__NVCACGTG_NPASNPAS2 (inferredBy_Orthology).
KCNAB2metacluster_130.6ZFP28 (directAnnotation).
KCNAB2hocomoco__PO5F1_HUMAN.H11MO.1.APOU5F1 (directAnnotation).
KCNAB2taipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
KCNAB2taipale_tf_pairs__ETV2_HOXB13_NCCGGAAGTYRTAAAN_CAPETV2; HOXB13 (directAnnotation).
KCNAB2taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
KCNAB2hdpi__FLI1FLI1 (directAnnotation).
KCNAB2taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
KCNAB2taipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
KCNAB2taipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
KCNAB2taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
KCNAB2taipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
KCNAB2taipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."