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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: ITGA4

Summary for ITGA4

Gene informationGene symbol

ITGA4

Ensembl ID

ENSG00000115232

Entrez ID

3676

Gene nameintegrin subunit alpha 4
SynonymsCD49D
Gene typeprotein_coding
UniProtAcc

P13612


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Dataset with differentially expressed gene: ITGA4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells0.3523211.71e-41

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.5328044.58e-09

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.4363630.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.3846630.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.6595410.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.4728190.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.3233334.42e-18

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.260361.66e-05

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.4697112.49e-28

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro-0.6521110.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreNK cells0.2521799.29e-24

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postCD4+ T cells0.3106392.66e-27

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)preMono/Macro-0.2808220.00e+00

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preCD8+ T cells0.3684180.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostcDCs0.3573264.13e-12

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.4689460.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.3370920.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells-0.346513.26e-04

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-0.7220981.00e-02

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreErythrocytes-0.2985067.45e-07

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD4+ T cells-0.3935738.75e-03

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Expression of ITGA4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ITGA4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ITGA4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ITGA4hsa-miR-513a-3p97.8305NM_000885
ITGA4hsa-miR-513c-3p97.8305NM_000885
ITGA4hsa-miR-6833-3p97.6404NM_000885
ITGA4hsa-miR-4768-5p97.6027NM_000885
ITGA4hsa-miR-129097.4572NM_001316312
ITGA4hsa-miR-526b-3p97.3074NM_000885
ITGA4hsa-miR-20a-5p97.1268NM_000885
ITGA4hsa-miR-106b-5p97.1268NM_000885
ITGA4hsa-miR-3606-3p97.0639NM_000885
ITGA4hsa-miR-6873-3p96.7388NM_000885
ITGA4hsa-miR-519d-3p96.3871NM_000885
ITGA4hsa-miR-106a-5p96.3871NM_000885
ITGA4hsa-miR-20b-5p96.3871NM_000885
ITGA4hsa-miR-17-5p96.3871NM_000885
ITGA4hsa-miR-93-5p96.3871NM_000885
ITGA4hsa-miR-548ah-5p95.3243NM_000885
ITGA4hsa-miR-360995.3243NM_000885
ITGA4hsa-miR-4796-3p95.2402NM_000885
ITGA4hsa-miR-569694.3479NM_000885
ITGA4hsa-miR-1212594.0411NM_000885
ITGA4hsa-miR-664b-3p93.9904NM_000885
ITGA4hsa-miR-579-3p93.9904NM_000885
ITGA4hsa-miR-57893.0004NM_000885
ITGA4hsa-miR-6871-3p92.9611NM_001316312
ITGA4hsa-miR-568892.6845NM_000885
ITGA4hsa-miR-1212492.5407NM_000885
ITGA4hsa-miR-369-3p91.0369NM_000885
ITGA4hsa-miR-495-3p90.8811NM_000885
ITGA4hsa-miR-7-1-3p90.789NM_000885
ITGA4hsa-miR-7-2-3p90.789NM_000885
ITGA4hsa-miR-380-3p90.1107NM_001316312
ITGA4hsa-miR-568390.021NM_000885
ITGA4hsa-miR-184389.7778NM_000885
ITGA4hsa-miR-4802-5p89.7778NM_000885
ITGA4hsa-miR-313389.7628NM_000885
ITGA4hsa-miR-4735-5p89.5952NM_000885
ITGA4hsa-miR-5004-3p89.4197NM_000885
ITGA4hsa-miR-3925-3p88.9628NM_000885
ITGA4hsa-miR-806388.102NM_000885
ITGA4hsa-miR-335-3p87.6916NM_000885
ITGA4hsa-miR-340-5p87.5764NM_000885
ITGA4hsa-miR-7161-3p87.192NM_000885
ITGA4hsa-miR-9-5p86.8668NM_000885
ITGA4hsa-miR-122b-5p86.7904NM_000885
ITGA4hsa-miR-7-5p86.6773NM_000885
ITGA4hsa-miR-5189-3p86.6703NM_001316312
ITGA4hsa-miR-3158-3p85.0714NM_000885
ITGA4hsa-miR-590-3p84.4787NM_000885
ITGA4hsa-miR-472982.9451NM_000885
ITGA4hsa-miR-576-5p82.5249NM_000885
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Motifs and transcription factors (TFs) regulating ITGA4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ITGA4metacluster_9.47PAX7 (inferredBy_Orthology).
ITGA4metacluster_45.6E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F4; E2F4 (directAnnotation). E2F2; E2F3 (inferredBy_Orthology).
ITGA4kznf__ZNF343_Imbeault2017_OM_RCADEZNF343 (directAnnotation).
ITGA4transfac_pro__M02913SP140 (inferredBy_Orthology).
ITGA4taipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
ITGA4homer__NCCACGTG_c-MycMYC (directAnnotation).
ITGA4taipale_tf_pairs__FOXO1_ELK1_RSCGGATGTTRTN_CAPELK1; FOXO1 (directAnnotation).
ITGA4taipale_tf_pairs__ETV2_FOXI1_RNCGGAANNAAACA_CAP_reprETV2; FOXI1 (directAnnotation).
ITGA4metacluster_141.2E2F2; E2F3 (directAnnotation).
ITGA4taipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
ITGA4swissregulon__hs__ETV6ETV6 (directAnnotation).
ITGA4taipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
ITGA4tfdimers__MD00007E2F1; IRF8 (directAnnotation).
ITGA4metacluster_178.16ZNF660; ZNF660 (directAnnotation).
ITGA4transfac_pro__M06239ZNF844 (directAnnotation).
ITGA4transfac_pro__M06660ZNF670 (directAnnotation).
ITGA4transfac_pro__M06273ZNF766 (directAnnotation).
ITGA4transfac_pro__M00655ETV4 (directAnnotation).
ITGA4metacluster_35.5ELF1; ELF2; ELF3; ELF3; ELK1; ELK4; ERF; ERG; ETS1; ETS1; ETS2; ETV7; ETV7; FLI1; FLI1 (directAnnotation).
ITGA4homer__ACAGGATGTGGT_ETS_RUNXRUNX1 (directAnnotation).
ITGA4transfac_pro__M06920ZNF256 (directAnnotation).
ITGA4jaspar__MA0136.3ELF5 (inferredBy_Orthology).
ITGA4metacluster_178.20ZKSCAN1 (directAnnotation). ZKSCAN1 (inferredBy_Orthology).
ITGA4transfac_pro__M05948ZNF582 (directAnnotation).
ITGA4taipale_tf_pairs__GCM1_FOXI1_RTMAACATRNGGGN_CAP_reprFOXI1; GCM1 (directAnnotation).
ITGA4transfac_pro__M06484ZNF683 (directAnnotation).
ITGA4metacluster_144.10ZNF100 (directAnnotation).
ITGA4transfac_pro__M02933ZBTB14 (inferredBy_Orthology).
ITGA4tfdimers__MD00046GATA1; GATA2; GATA3; GATA4; GATA5; GATA6; SMAD4 (directAnnotation).
ITGA4tfdimers__MD00165CRX; FOS; FOSB; FOSL1; FOSL2; JUN; JUNB; JUND (directAnnotation).
ITGA4hdpi__NRLNRL (directAnnotation).
ITGA4flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
ITGA4hdpi__FEZF2FEZF2 (directAnnotation).
ITGA4transfac_pro__M07310SP5 (directAnnotation).
ITGA4homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
ITGA4swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
ITGA4hdpi__HTATIP2HTATIP2 (directAnnotation).
ITGA4hdpi__ZNF304ZNF304 (directAnnotation).
ITGA4transfac_pro__M01240GTF2IRD1 (directAnnotation).
ITGA4metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
ITGA4cisbp__M07938E2F1 (directAnnotation).
ITGA4metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
ITGA4tfdimers__MD00483ZBTB14 (directAnnotation).
ITGA4transfac_pro__M12697ZNF142 (directAnnotation).
ITGA4transfac_pro__M00716ZBTB14 (directAnnotation).
ITGA4transfac_pro__M03806ZBTB7C (directAnnotation).
ITGA4transfac_pro__M04893TAF1 (directAnnotation).
ITGA4transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
ITGA4transfac_pro__M04916TAF1 (directAnnotation).
ITGA4jaspar__MA1650.1ZBTB14 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
ITGA4"ATL1102"

DB04997

small molecule
ITGA4"CDP323"

DB05092

small molecule
ITGA4"Natalizumab"

DB00108

biotech
ITGA4"R1295"

DB05122

small molecule
ITGA4"R411"

DB05468

small molecule
ITGA4"Tinzaparin"

DB06822

small molecule
ITGA4"Vedolizumab"

DB09033

biotech
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."